Struct SegmentPart 

pub struct SegmentPart {
    pub kmer1: u64,
    pub kmer2: u64,
    pub sample_name: String,
    pub contig_name: String,
    pub seg_data: Vec<u8>,
    pub is_rev_comp: bool,
    pub seg_part_no: u32,
}

Segment part data

Matches C++ AGC’s seg_part_t (agc_compressor.h:29-120) and kk_seg_part_t (lines 124-165)

Fields:

• kmer1, kmer2: First and last k-mers of segment
• sample_name, contig_name: Origin of segment
• seg_data: Compressed segment bytes
• is_rev_comp: Whether segment is reverse complemented
• seg_part_no: Part number within contig

Ordering: By (sample_name, contig_name, seg_part_no) for deterministic storage

Fields

kmer1: u64

kmer2: u64

sample_name: String

contig_name: String

seg_data: Vec<u8>

is_rev_comp: bool

seg_part_no: u32

Trait Implementations

impl Clone for SegmentPart

fn clone(&self) -> SegmentPart

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for SegmentPart

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Ord for SegmentPart

fn cmp(&self, other: &Self) -> Ordering

This method returns an Ordering between self and other.

fn max(self, other: Self) -> Self

where Self: Sized,

Compares and returns the maximum of two values.

fn min(self, other: Self) -> Self

where Self: Sized,

Compares and returns the minimum of two values.

fn clamp(self, min: Self, max: Self) -> Self

where Self: Sized,

Restrict a value to a certain interval.

impl PartialEq for SegmentPart

fn eq(&self, other: &SegmentPart) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl PartialOrd for SegmentPart

fn partial_cmp(&self, other: &Self) -> Option<Ordering>

This method returns an ordering between self and other values if one exists.

fn lt(&self, other: &Rhs) -> bool

Tests less than (for self and other) and is used by the < operator.

fn le(&self, other: &Rhs) -> bool

Tests less than or equal to (for self and other) and is used by the <= operator.

fn gt(&self, other: &Rhs) -> bool

Tests greater than (for self and other) and is used by the > operator.

fn ge(&self, other: &Rhs) -> bool

Tests greater than or equal to (for self and other) and is used by the >= operator.

impl Eq for SegmentPart

impl StructuralPartialEq for SegmentPart