Struct SegmentDesc 

pub struct SegmentDesc {
    pub group_id: u32,
    pub in_group_id: u32,
    pub is_rev_comp: bool,
    pub raw_length: u32,
}

A segment descriptor identifying a compressed segment

Architecture

Segments are organized into groups by terminal k-mers (front and back). Each group has two streams:

• ref_stream (xGr): Contains reference segment (in_group_id = 0)
• delta_stream (xGd): Contains LZ-encoded segments (in_group_id = 1, 2, 3, …)

For groups >= 16 (LZ-enabled):

• Reference is stored raw in ref_stream
• Other segments are LZ-encoded against reference

For groups 0-15 (raw-only):

• No LZ encoding, all segments stored raw

Critical: in_group_id Indexing

• in_group_id = 0: ALWAYS the reference segment (in ref_stream)
• in_group_id >= 1: Delta segments (in delta_stream)

IMPORTANT: Do NOT store reference in delta_stream! It must be:

1. Written to ref_stream
2. Registered with in_group_id = 0
3. Not included in delta pack

Fields

group_id: u32

in_group_id: u32

is_rev_comp: bool

raw_length: u32

Implementations

impl SegmentDesc

pub fn new( group_id: u32, in_group_id: u32, is_rev_comp: bool, raw_length: u32, ) -> Self

pub fn empty() -> Self

Trait Implementations

impl Clone for SegmentDesc

fn clone(&self) -> SegmentDesc

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for SegmentDesc

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl PartialEq for SegmentDesc

fn eq(&self, other: &SegmentDesc) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Copy for SegmentDesc

impl StructuralPartialEq for SegmentDesc