Struct GraphStats 

pub struct GraphStats {
    pub node_count: usize,
    pub edge_count: usize,
    pub bubble_count: usize,
    pub max_bubble_depth: usize,
    pub coverage_mean: f64,
    pub coverage_variance: f64,
    pub edge_weight_gini: f64,
    pub single_support_fraction: f64,
    pub mean_column_entropy: f64,
    pub longest_bubble_span: usize,
    pub median_input_read_len: usize,
}

Per-graph statistics computed in a single O(V+E) pass.

Fields

node_count: usize

edge_count: usize

bubble_count: usize

Number of heterozygous nodes (nodes with 2+ successors each above min_allele_freq).

max_bubble_depth: usize

coverage_mean: f64

Mean coverage across all nodes.

coverage_variance: f64

Coverage variance across all nodes.

edge_weight_gini: f64

Gini coefficient of edge weights (0 = uniform, 1 = all weight on one edge).

single_support_fraction: f64

Fraction of nodes supported by exactly one read.

mean_column_entropy: f64

Mean per-column Shannon entropy (bits).

longest_bubble_span: usize

Span in bases of the longest arm across all bubbles that meet the min_allele_freq threshold. 0 when no qualifying bubble exists. Arms longer than 4096 nodes are capped at 4096.

median_input_read_len: usize

Median length (in bases) of all reads that built this graph, including the seed. 0 when no reads have been added. Used by [diagnose] to detect consensus truncation: a consensus much shorter than the median input read is a signal that banded DP converged to the wrong diagonal.

Trait Implementations

impl Clone for GraphStats

fn clone(&self) -> GraphStats

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for GraphStats

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for GraphStats

fn default() -> GraphStats

Returns the “default value” for a type.