Struct Disease 

pub struct Disease {
    pub term: Option<OntologyClass>,
    pub excluded: bool,
    pub onset: Option<TimeElement>,
    pub resolution: Option<TimeElement>,
    pub disease_stage: Vec<OntologyClass>,
    pub clinical_tnm_finding: Vec<OntologyClass>,
    pub primary_site: Option<OntologyClass>,
    pub laterality: Option<OntologyClass>,
}

Message to indicate a disease (diagnosis) and its recorded onset.

Fields

term: Option<OntologyClass>

The identifier of this disease e.g. MONDO:0007043, OMIM:101600, Orphanet:710, DOID:14705 (note these are all equivalent) ARGO mapping primary_diagnosis::submitter_primary_diagnosis_id

excluded: bool

Flag to indicate whether the disease was observed or not. Default is ‘false’, in other words the disease was observed. Therefore it is only required in cases to indicate that the disease was looked for, but found to be absent. More formally, this modifier indicates the logical negation of the OntologyClass used in the ‘term’ field. CAUTION It is imperative to check this field for correct interpretation of the disease!

onset: Option<TimeElement>

The onset of the disease. The values of this will come from the HPO onset hierarchy i.e. subclasses of HP:0003674 FHIR mapping: Condition.onset ARGO mapping primary_diagnosis::age_at_diagnosis

resolution: Option<TimeElement>

disease_stage: Vec<OntologyClass>

Disease staging, the extent to which a disease has developed. For cancers, see https://www.cancer.gov/about-cancer/diagnosis-staging/staging Valid values include child terms of NCIT:C28108 (Disease Stage Qualifier) ARGO mapping primary_diagnosis::clinical_tumour_staging_system ARGO mapping primary_diagnosis::clinical_stage_group

clinical_tnm_finding: Vec<OntologyClass>

Cancer findings in the TNM system that is relevant to the diagnosis of cancer. See https://www.cancer.gov/about-cancer/diagnosis-staging/staging Valid values include child terms of NCIT:C48232 (Cancer TNM Finding) ARGO mapping primary_diagnosis::clinical_t_category ARGO mapping primary_diagnosis::clinical_n_category ARGO mapping primary_diagnosis::clinical_m_category

primary_site: Option<OntologyClass>

The text term used to describe the primary site of disease, as categorized by the World Health Organization’s (WHO) International Classification of Diseases for Oncology (ICD-O). This categorization groups cases into general

laterality: Option<OntologyClass>

The term used to indicate laterality of diagnosis, if applicable. (Codelist reference: NCI CDE: 4122391)

Trait Implementations

impl Clone for Disease

fn clone(&self) -> Disease

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Disease

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for Disease

fn default() -> Self

Returns the “default value” for a type.

impl Message for Disease

fn encoded_len(&self) -> usize

Returns the encoded length of the message without a length delimiter.

fn clear(&mut self)

Clears the message, resetting all fields to their default.

fn encode(&self, buf: &mut impl BufMut) -> Result<(), EncodeError>

where Self: Sized,

Encodes the message to a buffer.

fn encode_to_vec(&self) -> Vec<u8>

where Self: Sized,

Encodes the message to a newly allocated buffer.

fn encode_length_delimited( &self, buf: &mut impl BufMut, ) -> Result<(), EncodeError>

where Self: Sized,

Encodes the message with a length-delimiter to a buffer.

fn encode_length_delimited_to_vec(&self) -> Vec<u8>

where Self: Sized,

Encodes the message with a length-delimiter to a newly allocated buffer.

fn decode(buf: impl Buf) -> Result<Self, DecodeError>

where Self: Default,

Decodes an instance of the message from a buffer.

fn decode_length_delimited(buf: impl Buf) -> Result<Self, DecodeError>

where Self: Default,

Decodes a length-delimited instance of the message from the buffer.

fn merge(&mut self, buf: impl Buf) -> Result<(), DecodeError>

where Self: Sized,

Decodes an instance of the message from a buffer, and merges it into self.

fn merge_length_delimited(&mut self, buf: impl Buf) -> Result<(), DecodeError>

where Self: Sized,

Decodes a length-delimited instance of the message from buffer, and merges it into self.

impl PartialEq for Disease

fn eq(&self, other: &Disease) -> bool

Equality operator ==.

fn ne(&self, other: &Rhs) -> bool

Inequality operator !=.

impl StructuralPartialEq for Disease