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BiomedicalFeatures

oxirs_embed::biomedical_embeddings::types

Struct BiomedicalFeatures 

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pub struct BiomedicalFeatures {
    pub gene_disease_associations: HashMap<(String, String), f32>,
    pub drug_target_affinities: HashMap<(String, String), f32>,
    pub pathway_memberships: HashMap<(String, String), f32>,
    pub protein_interactions: HashMap<(String, String), f32>,
    pub sequence_similarities: HashMap<(String, String), f32>,
    pub structure_similarities: HashMap<(String, String), f32>,
    pub expression_correlations: HashMap<(String, String), f32>,
    pub tissue_expression: HashMap<(String, String), f32>,
}
Expand description

Biomedical-specific features for enhanced embeddings

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§gene_disease_associations: HashMap<(String, String), f32>

Gene-disease association scores

§drug_target_affinities: HashMap<(String, String), f32>

Drug-target binding affinities

§pathway_memberships: HashMap<(String, String), f32>

Pathway membership scores

§protein_interactions: HashMap<(String, String), f32>

Protein-protein interaction scores

§sequence_similarities: HashMap<(String, String), f32>

Sequence similarity scores

§structure_similarities: HashMap<(String, String), f32>

Chemical structure similarities

§expression_correlations: HashMap<(String, String), f32>

Expression correlations

§tissue_expression: HashMap<(String, String), f32>

Tissue-specific expression

Trait Implementations§

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impl Clone for BiomedicalFeatures

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fn clone(&self) -> BiomedicalFeatures

Returns a duplicate of the value. Read more
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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Debug for BiomedicalFeatures

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl Default for BiomedicalFeatures

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fn default() -> BiomedicalFeatures

Returns the “default value” for a type. Read more
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impl<'de> Deserialize<'de> for BiomedicalFeatures

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fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>
where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer. Read more
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impl Serialize for BiomedicalFeatures

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fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>
where __S: Serializer,

Serialize this value into the given Serde serializer. Read more

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🔬This is a nightly-only experimental API. (clone_to_uninit)
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