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MapperGraph

Struct MapperGraph 

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pub struct MapperGraph {
    pub nodes: Vec<MapperNode>,
    pub edges: Vec<(usize, usize)>,
}
Expand description

Mapper graph: nodes (clusters) connected when adjacent cover intervals share common points.

Implements a simplified version of the Mapper algorithm:

  1. Cover the filter function range with overlapping intervals.
  2. Restrict the point cloud to each interval.
  3. Cluster each restriction (here: single-linkage at cluster_eps).
  4. Connect clusters from adjacent intervals that share points.

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§nodes: Vec<MapperNode>

Nodes of the graph.

§edges: Vec<(usize, usize)>

Edges between nodes: (node_i, node_j).

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impl MapperGraph

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pub fn build( points: &[[f64; 2]], filter_values: &[f64], n_intervals: usize, overlap: f64, cluster_eps: f64, ) -> Self

Build a MapperGraph from a point cloud using a 1-D filter function.

§Parameters
  • points: 2-D point cloud.
  • filter_values: scalar filter value for each point (e.g., x-coordinate).
  • n_intervals: number of cover intervals.
  • overlap: fractional overlap between adjacent intervals (in [0, 1)).
  • cluster_eps: distance threshold for single-linkage clustering within each cover interval.
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pub fn n_nodes(&self) -> usize

Number of nodes in the graph.

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pub fn n_edges(&self) -> usize

Number of edges in the graph.

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pub fn degree(&self, i: usize) -> usize

Degree of node i (number of edges incident to it).

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pub fn total_point_count(&self) -> usize

Total number of points across all nodes (with possible duplicates from overlap).

Trait Implementations§

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impl Clone for MapperGraph

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fn clone(&self) -> MapperGraph

Returns a duplicate of the value. Read more
1.0.0 (const: unstable) · Source§

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Debug for MapperGraph

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl Default for MapperGraph

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fn default() -> MapperGraph

Returns the “default value” for a type. Read more

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)
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