Struct GeneExpressionMatrix 

pub struct GeneExpressionMatrix {
    pub genes: Vec<String>,
    pub samples: Vec<String>,
    pub data: Vec<Vec<f64>>,
}

Gene expression matrix (simplified).

Fields

genes: Vec<String>

samples: Vec<String>

data: Vec<Vec<f64>>

Implementations

impl GeneExpressionMatrix

pub fn new( genes: Vec<String>, samples: Vec<String>, data: Vec<Vec<f64>>, ) -> Self

Create a gene expression matrix.

pub fn mean_expression(&self, gene_idx: usize) -> f64

Compute mean expression of gene at index i.

pub fn num_genes(&self) -> usize

Number of genes.

pub fn num_samples(&self) -> usize

Number of samples.

Trait Implementations

impl Clone for GeneExpressionMatrix

fn clone(&self) -> GeneExpressionMatrix

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for GeneExpressionMatrix

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.