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ConformanceError

Enum ConformanceError 

Source
#[non_exhaustive]
pub enum ConformanceError {
#[non_exhaustive]
Source { position: usize, error: Error, },
#[non_exhaustive]
PeakArrayLengthMismatch { native_id: String, mz_len: usize, intensity_len: usize, },
#[non_exhaustive]
MobilityArrayLengthMismatch { native_id: String, mz_len: usize, mobility_len: usize, },
#[non_exhaustive]
TicMismatch { native_id: String, declared: f64, computed: f64, },
#[non_exhaustive]
BasePeakIntensityMismatch { native_id: String, declared: f64, computed: f64, },
#[non_exhaustive]
MissingPrecursor { native_id: String, ms_level: u32, },
#[non_exhaustive]
RetentionTimeNonMonotonic { prefix: String, previous: f64, current: f64, native_id: String, },
#[non_exhaustive]
IndexSequence { native_id: String, previous: Option<usize>, current: usize, },
#[non_exhaustive]
EmptySpectrum { native_id: String, }, }
Expand description

Failure modes detected by assert_source_invariants.

The enum and each variant are #[non_exhaustive]; match with { .. } patterns and a wildcard arm. Field names say what they hold: the offending spectrum’s native_id, the value the parser declared, and the value computed from the arrays.

Variants (Non-exhaustive)§

This enum is marked as non-exhaustive
Non-exhaustive enums could have additional variants added in future. Therefore, when matching against variants of non-exhaustive enums, an extra wildcard arm must be added to account for any future variants.
§

#[non_exhaustive]
Source

The source yielded Err instead of a spectrum. position is the zero-based position in the stream.

Fields

This variant is marked as non-exhaustive
Non-exhaustive enum variants could have additional fields added in future. Therefore, non-exhaustive enum variants cannot be constructed in external crates and cannot be matched against.
§position: usize
§error: Error
§

#[non_exhaustive]
PeakArrayLengthMismatch

mz / intensity arrays have mismatched lengths.

Fields

This variant is marked as non-exhaustive
Non-exhaustive enum variants could have additional fields added in future. Therefore, non-exhaustive enum variants cannot be constructed in external crates and cannot be matched against.
§native_id: String
§mz_len: usize
§intensity_len: usize
§

#[non_exhaustive]
MobilityArrayLengthMismatch

inv_mobility_per_peak.len() did not match mz.len().

Fields

This variant is marked as non-exhaustive
Non-exhaustive enum variants could have additional fields added in future. Therefore, non-exhaustive enum variants cannot be constructed in external crates and cannot be matched against.
§native_id: String
§mz_len: usize
§mobility_len: usize
§

#[non_exhaustive]
TicMismatch

total_ion_current did not match sum(intensity) within tolerance.

Fields

This variant is marked as non-exhaustive
Non-exhaustive enum variants could have additional fields added in future. Therefore, non-exhaustive enum variants cannot be constructed in external crates and cannot be matched against.
§native_id: String
§declared: f64
§computed: f64
§

#[non_exhaustive]
BasePeakIntensityMismatch

base_peak_intensity did not match max(intensity) within tolerance.

Fields

This variant is marked as non-exhaustive
Non-exhaustive enum variants could have additional fields added in future. Therefore, non-exhaustive enum variants cannot be constructed in external crates and cannot be matched against.
§native_id: String
§declared: f64
§computed: f64
§

#[non_exhaustive]
MissingPrecursor

MS2+ spectrum was missing precursor info.

Fields

This variant is marked as non-exhaustive
Non-exhaustive enum variants could have additional fields added in future. Therefore, non-exhaustive enum variants cannot be constructed in external crates and cannot be matched against.
§native_id: String
§ms_level: u32
§

#[non_exhaustive]
RetentionTimeNonMonotonic

Retention time went backwards within one acquisition stream.

Fields

This variant is marked as non-exhaustive
Non-exhaustive enum variants could have additional fields added in future. Therefore, non-exhaustive enum variants cannot be constructed in external crates and cannot be matched against.
§prefix: String
§previous: f64
§current: f64
§native_id: String
§

#[non_exhaustive]
IndexSequence

Spectrum index sequence was not strictly increasing or did not start at 0.

Fields

This variant is marked as non-exhaustive
Non-exhaustive enum variants could have additional fields added in future. Therefore, non-exhaustive enum variants cannot be constructed in external crates and cannot be matched against.
§native_id: String
§previous: Option<usize>
§current: usize
§

#[non_exhaustive]
EmptySpectrum

Spectrum had no peaks at all.

Fields

This variant is marked as non-exhaustive
Non-exhaustive enum variants could have additional fields added in future. Therefore, non-exhaustive enum variants cannot be constructed in external crates and cannot be matched against.
§native_id: String

Trait Implementations§

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impl Debug for ConformanceError

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl Display for ConformanceError

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl Error for ConformanceError

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fn source(&self) -> Option<&(dyn Error + 'static)>

Returns the lower-level source of this error, if any. Read more
1.0.0 · Source§

fn description(&self) -> &str

👎Deprecated since 1.42.0:

use the Display impl or to_string()

1.0.0 · Source§

fn cause(&self) -> Option<&dyn Error>

👎Deprecated since 1.33.0:

replaced by Error::source, which can support downcasting

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fn provide<'a>(&'a self, request: &mut Request<'a>)

🔬This is a nightly-only experimental API. (error_generic_member_access)
Provides type-based access to context intended for error reports. Read more

Auto Trait Implementations§

Blanket Implementations§

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more
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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more
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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> ToString for T
where T: Display + ?Sized,

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fn to_string(&self) -> String

Converts the given value to a String. Read more
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impl<T, U> TryFrom<U> for T
where U: Into<T>,

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type Error = !

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, !>

Performs the conversion.
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impl<T, U> TryInto<U> for T
where U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.