Struct noodles::fastq::fai::Reader

pub struct Reader<R> { /* private fields */ }

A FASTQ index reader.

Implementations

impl<R> Reader<R>

where R: BufRead,

pub fn new(inner: R) -> Reader<R>

Creates a FASTQ index reader.

Examples

use noodles_fastq::fai;
let data = b"r0\t4\t4\t4\t5\t11\n";
let mut reader = fai::Reader::new(&data[..]);

pub fn read_record(&mut self, buf: &mut String) -> Result<usize, Error>

Reads a raw FASTQ index record.

The given buffer will not include the trailing newline. It can subsequently be parsed as a super::Record.

The position of the stream is expected to be at the start or at the start of another record.

If successful, this returns the number of bytes read from the stream. If the number of bytes read is 0, the stream reached EOF.

Examples

use noodles_fastq::fai;

let data = b"r0\t4\t4\t4\t5\t11\n";
let mut reader = fai::Reader::new(&data[..]);

let mut buf = String::new();
reader.read_record(&mut buf)?;

assert_eq!(buf, "r0\t4\t4\t4\t5\t11");

Trait Implementations

impl<R> Debug for Reader<R>

where R: Debug,

fn fmt(&self, f: &mut Formatter<'_>) -> Result<(), Error>

Formats the value using the given formatter.