Enum noodles_vcf::header::ParseError [−][src]
pub enum ParseError {
Show 17 variants
MissingFileFormat,
UnexpectedFileFormat,
InvalidFileFormat(ParseError),
InvalidRecord(ParseError),
InvalidRecordValue,
InvalidInfo(TryFromRecordError),
InvalidFilter(TryFromRecordError),
InvalidFormat(TryFromRecordError),
InvalidAlternativeAllele(TryFromRecordError),
InvalidContig(TryFromRecordError),
InvalidMeta(TryFromRecordError),
InvalidSample(TryFromRecordError),
InvalidPedigree(TryFromRecordError),
MissingHeader,
InvalidHeader(String, String),
DuplicateSampleName(String),
ExpectedEof,
}
Expand description
An error returned when a raw VCF header fails to parse.
Variants
The file format (fileformat
) is missing.
The file format (fileformat
) appears other than the first line.
InvalidFileFormat(ParseError)
The file format (fileformat
) is invalid.
Tuple Fields of InvalidFileFormat
0: ParseError
InvalidRecord(ParseError)
A record is invalid.
Tuple Fields of InvalidRecord
0: ParseError
A record has an invalid value.
InvalidInfo(TryFromRecordError)
An information record (INFO
) is invalid.
Tuple Fields of InvalidInfo
InvalidFilter(TryFromRecordError)
A filter record (FILTER
) is invalid.
Tuple Fields of InvalidFilter
InvalidFormat(TryFromRecordError)
A genotype format record (FORMAT
) is invalid.
Tuple Fields of InvalidFormat
InvalidAlternativeAllele(TryFromRecordError)
A symboloic alternate allele record (ALT
) is invalid.
Tuple Fields of InvalidAlternativeAllele
InvalidContig(TryFromRecordError)
A contig record (contig
) is invalid.
Tuple Fields of InvalidContig
InvalidMeta(TryFromRecordError)
A meta record (META
) is invalid.
Tuple Fields of InvalidMeta
InvalidSample(TryFromRecordError)
A sample record (SAMPLE
) is invalid.
Tuple Fields of InvalidSample
InvalidPedigree(TryFromRecordError)
A pedigree record (PEDIGREE
) is invalid.
Tuple Fields of InvalidPedigree
The header is missing.
The header is invalid.
DuplicateSampleName(String)
A sample name is duplicated.
§ 1.5 Header line syntax (2021-01-13): “Duplicate sample IDs are not allowed.”
Tuple Fields of DuplicateSampleName
0: String
More data unexpectedly appears after the header header (#CHROM
…).
Trait Implementations
This method tests for self
and other
values to be equal, and is used
by ==
. Read more
This method tests for !=
.
Auto Trait Implementations
impl RefUnwindSafe for ParseError
impl Send for ParseError
impl Sync for ParseError
impl Unpin for ParseError
impl UnwindSafe for ParseError
Blanket Implementations
Mutably borrows from an owned value. Read more
Compare self to key
and return true
if they are equal.