Struct NcbiSqliteTaxonomy

pub struct NcbiSqliteTaxonomy { /* private fields */ }

Implementations

impl NcbiSqliteTaxonomy

pub fn new(db_url: Option<&str>) -> Self

pub fn from_connection(connection: SqliteConnection) -> Self

Trait Implementations

impl NcbiTaxonomy for NcbiSqliteTaxonomy

fn contains_id(&self, taxid: i32) -> bool

fn contains_name(&self, name_str: &str) -> bool

fn is_descendant(&self, name_str: &str, ancestor: &str) -> bool

fn is_descendant_taxid(&self, taxid: i32, ancestor_taxid: i32) -> bool

fn get_name_by_id(&self, taxid: i32) -> Option<String>

fn get_id_by_name(&self, name_str: &str) -> Option<i32>

fn get_lineage(&self, name: &str) -> Option<Vec<i32>>

fn get_distance_to_common_ancestor_taxid( &self, taxid1: i32, taxid2: i32, only_canonical: bool, ) -> Option<(i32, i32)>

fn get_distance_to_common_ancestor( &self, name1: &str, name2: &str, only_canonical: bool, ) -> Option<(i32, String)>