Struct ReadConfigBuilder 

pub struct ReadConfigBuilder { /* private fields */ }

Builder for ReadConfig.

Implementations

impl ReadConfigBuilder

pub fn number(self, value: u32) -> Self

Total number of reads to generate

pub fn mapq_range(self, value: (u8, u8)) -> Self

Mapping quality range [min, max]

pub fn base_qual_range(self, value: (u8, u8)) -> Self

Base quality score range [min, max]

pub fn len_range(self, value: (f32, f32)) -> Self

Read length range as fraction of contig [min, max] (e.g.: [0.1, 0.8] = 10% to 80%)

pub fn barcode(self, value: String) -> Self

Optional barcode DNA sequence to add to read ends

pub fn delete(self, value: (f32, f32)) -> Self

Optional deletion: fractional range [start, end] of read to delete (e.g., [0.5, 0.7] deletes middle 20%)

pub fn insert_middle(self, value: String) -> Self

Optional sequence to insert at the middle of the read

pub fn mismatch(self, value: f32) -> Self

Optional mismatch fraction: random fraction of bases to mutate (e.g., 0.5 = 50% of bases)

pub fn mods(self, value: Vec<ModConfig>) -> Self

Modification configurations

pub fn build(self) -> Result<ReadConfig, Error>

Builds a new ReadConfig.

Errors

If a required field has not been initialized.

Trait Implementations

impl Clone for ReadConfigBuilder

fn clone(&self) -> ReadConfigBuilder

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Default for ReadConfigBuilder

fn default() -> Self

Returns the “default value” for a type.