Struct RestrictionEnzyme 

pub struct RestrictionEnzyme {
    pub name: String,
    pub cut_seq: Vec<NucleotideGeneral>,
    pub cut_after: u8,
}

Fields

name: String

cut_seq: Vec<NucleotideGeneral>

From the 5’ end.

cut_after: u8

Index to cut after, from the 5’ end. For blunt ends, this will be halfway through the seq (rounded down)

Implementations

impl RestrictionEnzyme

pub fn new(name: &str, cut_seq: Vec<NucleotideGeneral>, cut_after: u8) -> Self

pub fn makes_blunt_ends(&self) -> bool

pub fn cut_depiction(&self) -> String

A depiction of where to cut.

pub fn overhang_top_left(&self, seq_segment: &[Nucleotide]) -> Vec<Nucleotide>

Find the overhanging NTs 5’ of a sequence’s top strand. seq_segment must be the same size as, and aligned with the cut sequence.

pub fn overhang_top_right(&self, seq_segment: &[Nucleotide]) -> Vec<Nucleotide>

pub fn overhang_bottom_left( &self, seq_segment: &[Nucleotide], ) -> Vec<Nucleotide>

pub fn overhang_bottom_right( &self, seq_segment: &[Nucleotide], ) -> Vec<Nucleotide>

Trait Implementations

impl Clone for RestrictionEnzyme

fn clone(&self) -> RestrictionEnzyme

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Hash for RestrictionEnzyme

fn hash<H: Hasher>(&self, state: &mut H)

Feeds this value into the given Hasher.

fn hash_slice<H>(data: &[Self], state: &mut H)

where H: Hasher, Self: Sized,

Feeds a slice of this type into the given Hasher.

impl PartialEq for RestrictionEnzyme

fn eq(&self, other: &Self) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Eq for RestrictionEnzyme