Enum Nucleotide

#[repr(u8)]
pub enum Nucleotide {
    T = 0,
    C = 1,
    A = 2,
    G = 3,
}

A DNA nucleotide. The u8 repr is for use with a compact binary format. This is the same nucleotide mapping as .2bit format.

Variants

T = 0

C = 1

A = 2

G = 3

Implementations

impl Nucleotide

pub fn from_u8_letter(val_u8: u8) -> Result<Self>

For interop with FASTA, GenBank, and SnapGene formats.

pub fn to_u8_letter(&self) -> u8

For interop with FASTA, GenBank, and SnapGene formats.

pub fn as_str(&self) -> &str

pub fn complement(self) -> Self

pub fn weight(&self) -> f32

Molecular weight, in Daltons, in a DNA strand. Weight source: NorthWestern

pub fn a_max(&self) -> f32

Optical density of a 1mL solution, in a cuvette with 1cm pathlength. Result is in nm. http://biotools.nubic.northwestern.edu/OligoCalc.html

pub fn molar_density(&self) -> f32

Optical density of a 1mL solution, in a cuvette with 1cm pathlength. Result is in 1/(Moles x cm) http://biotools.nubic.northwestern.edu/OligoCalc.html

Trait Implementations

impl<'__de> BorrowDecode<'__de> for Nucleotide

fn borrow_decode<__D: BorrowDecoder<'__de>>( decoder: &mut __D, ) -> Result<Self, DecodeError>

Attempt to decode this type with the given BorrowDecode.

impl Clone for Nucleotide

fn clone(&self) -> Nucleotide

Returns a copy of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Nucleotide

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Decode for Nucleotide

fn decode<__D: Decoder>(decoder: &mut __D) -> Result<Self, DecodeError>

Attempt to decode this type with the given Decode.

impl Encode for Nucleotide

fn encode<__E: Encoder>(&self, encoder: &mut __E) -> Result<(), EncodeError>

Encode a given type.

impl Hash for Nucleotide

fn hash<__H: Hasher>(&self, state: &mut __H)

Feeds this value into the given Hasher.

fn hash_slice<H>(data: &[Self], state: &mut H)

where H: Hasher, Self: Sized,

Feeds a slice of this type into the given Hasher.

impl PartialEq for Nucleotide

fn eq(&self, other: &Nucleotide) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl TryFrom<u8> for Nucleotide

type Error = TryFromPrimitiveError<Nucleotide>

The type returned in the event of a conversion error.

fn try_from(number: u8) -> Result<Self, TryFromPrimitiveError<Self>>

Performs the conversion.

impl TryFromPrimitive for Nucleotide

const NAME: &'static str = "Nucleotide"

type Primitive = u8

type Error = TryFromPrimitiveError<Nucleotide>

fn try_from_primitive( number: Self::Primitive, ) -> Result<Self, TryFromPrimitiveError<Self>>

impl Copy for Nucleotide

impl Eq for Nucleotide

impl StructuralPartialEq for Nucleotide