FeatureDeconvolutionEngine

mzdeisotope_map

Struct FeatureDeconvolutionEngine 

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pub struct FeatureDeconvolutionEngine<'lifespan, T: Clone + Default, C: FeatureLike<MZ, T> + Clone + Default, S: IsotopicPatternScorer, F: IsotopicFitFilter> { /* private fields */ }

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impl<'lifespan, T: Clone + Default, C: FeatureLike<MZ, T> + Clone + Default, S: IsotopicPatternScorer, F: IsotopicFitFilter> FeatureDeconvolutionEngine<'lifespan, T, C, S, F>

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pub fn new<I: Into<IsotopicModelLike<'lifespan>>>( isotopic_params: FeatureSearchParams, isotopic_model: I, scorer: S, fit_filter: F, ) -> Self

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pub fn populate_isotopic_model_cache( &mut self, min_mz: f64, max_mz: f64, min_charge: i32, max_charge: i32, )

Pre-calculcate and cache all isotopic patterns between min_mz and max_mz for charge states between min_charge and max_charge.

If this method is not used, experimental peaks will be used to seed the isotopic pattern caches which may lead to slightly different solutions depending upon the order in which peak lists are processed.

§See also

IsotopicPatternGenerator::populate_cache

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pub fn deconvolute_features( &mut self, features: FeatureMap<MZ, T, C>, error_tolerance: Tolerance, charge_range: ChargeRange, minimum_size: usize, maximum_time_gap: f64, minimum_intensity: f32, max_missed_peaks: usize, ) -> Result<FeatureMap<Mass, T, DeconvolvedSolutionFeature<T>>, DeconvolutionError>

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impl<'lifespan, T: Clone + Clone + Default, C: Clone + FeatureLike<MZ, T> + Clone + Default, S: Clone + IsotopicPatternScorer, F: Clone + IsotopicFitFilter> Clone for FeatureDeconvolutionEngine<'lifespan, T, C, S, F>

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fn clone(&self) -> FeatureDeconvolutionEngine<'lifespan, T, C, S, F>

Returns a duplicate of the value. Read more
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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl<'lifespan, T: Debug + Clone + Default, C: Debug + FeatureLike<MZ, T> + Clone + Default, S: Debug + IsotopicPatternScorer, F: Debug + IsotopicFitFilter> Debug for FeatureDeconvolutionEngine<'lifespan, T, C, S, F>

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

Auto Trait Implementations§

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impl<'lifespan, T, C, S, F> Freeze for FeatureDeconvolutionEngine<'lifespan, T, C, S, F>
where S: Freeze, F: Freeze,

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impl<'lifespan, T, C, S, F> RefUnwindSafe for FeatureDeconvolutionEngine<'lifespan, T, C, S, F>
where S: RefUnwindSafe, F: RefUnwindSafe, C: RefUnwindSafe, T: RefUnwindSafe,

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impl<'lifespan, T, C, S, F> Send for FeatureDeconvolutionEngine<'lifespan, T, C, S, F>
where S: Send, F: Send, C: Send, T: Send,

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impl<'lifespan, T, C, S, F> Sync for FeatureDeconvolutionEngine<'lifespan, T, C, S, F>
where S: Sync, F: Sync, C: Sync, T: Sync,

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impl<'lifespan, T, C, S, F> Unpin for FeatureDeconvolutionEngine<'lifespan, T, C, S, F>
where S: Unpin, F: Unpin, C: Unpin, T: Unpin,

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impl<'lifespan, T, C, S, F> UnwindSafe for FeatureDeconvolutionEngine<'lifespan, T, C, S, F>
where S: UnwindSafe, F: UnwindSafe, C: UnwindSafe, T: UnwindSafe,

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🔬This is a nightly-only experimental API. (clone_to_uninit)
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