Struct ChainRef 

pub struct ChainRef<'a> { /* private fields */ }

One chain.

Implementations

impl<'a> ChainRef<'a>

pub const fn index(self) -> ChainIndex

This chain’s position.

pub fn label_asym_id(self) -> Option<SymbolId>

The normalised chain label.

pub fn label(self) -> Option<&'a str>

The normalised chain label as text.

pub fn auth_asym_id(self) -> Option<SymbolId>

The depositor’s chain label, where the file carried one.

pub fn auth_label(self) -> Option<&'a str>

The depositor’s chain label as text.

pub fn entity(self) -> Option<EntityIndex>

The species this chain instantiates.

pub fn polymer_kind(self) -> PolymerKind

What kind of polymer this chain is.

pub fn residues(self) -> impl Iterator<Item = ResidueRef<'a>>

The residues of this chain.

pub fn residue(self, number: i32) -> Option<ResidueRef<'a>>

The residue with this number, in whichever namespace carries it.

pub fn residue_at(self, position: usize) -> Option<ResidueRef<'a>>

The residue at one position within this chain.

Trait Implementations

impl<'a> ChainSequenceExt<'a> for ChainRef<'a>

fn observed_sequence(self) -> Vec<SymbolId>

Component identifiers actually modelled, in topology order.

fn canonical_sequence(self) -> &'a [SymbolId]

Entity sequence that should have been present.

fn reference_sequences(self) -> Vec<&'a ReferenceSequence>

Database sequences associated with the chain’s entity.

fn sequence_mapping(self) -> Vec<SequenceMapping<'a>>

Observed-to-canonical-to-reference position mapping.

fn missing_residues(self) -> Vec<MissingResidue>

Canonical positions not represented by an observed residue.

impl<'a> Clone for ChainRef<'a>

fn clone(&self) -> Self

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl<'a> Copy for ChainRef<'a>

impl<'a> Debug for ChainRef<'a>

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.