Expand description
The aim of this crate is to provide Microbiology friendly Rust functions for bioinformatics.
With the genbank parser, you are able to parse a genbank format file, then write into gff3 format
It is also possible to print the DNA sequences extracted from the coding sequences (genes, ffn format), plus the protein fasta sequences (faa format).
Additionally, you can create new features and records and save them either in genbank or gff3 format
Modules§
- hamming
- metrics
- The purpose of seqmetrics is to allow calculations of protein sequence parameters We define a set of amino acid getters to allow getting of the protein sequence as either the three letter code such as Trp, Phe, the full name such as alanine, glycine or the single letter code such as Y, A
- write_
dst_ csv