Struct libmatchtigs::GreedytigAlgorithmConfiguration

source · [−]

pub struct GreedytigAlgorithmConfiguration {
    pub threads: usize,
    pub k: usize,
    pub staged_parallelism_divisor: Option<f64>,
    pub resource_limit_factor: usize,
    pub node_weight_array_type: NodeWeightArrayType,
    pub heap_type: HeapType,
    pub performance_data_type: PerformanceDataType,
}

Expand description

The options for the greedy matchtigs algorithm.

Fields

threads: usize

The number of threads to use.

k: usize

The k used to build the de Bruijn graph.

staged_parallelism_divisor: Option<f64>

If given, enables staged parallelism mode. In this mode, shortest path queries are limited in the amount of memory they can use, and larger queries are postponed to be executed with less queries in parallel.

resource_limit_factor: usize

If staged paralallelism mode is on, then the resource limits are calculated based on the existing nodes in the graph times this factor, divided by the number of threads.

node_weight_array_type: NodeWeightArrayType

The type of the node weight array used by Dijkstra’s algorithm.

heap_type: HeapType

The type of the heap used by Dijkstra’s algorithm.

performance_data_type: PerformanceDataType

The type of the performance data collector used by Dikstra’s algorithm.

Auto Trait Implementations

impl RefUnwindSafe for GreedytigAlgorithmConfiguration

impl Send for GreedytigAlgorithmConfiguration

impl Sync for GreedytigAlgorithmConfiguration

impl Unpin for GreedytigAlgorithmConfiguration

impl UnwindSafe for GreedytigAlgorithmConfiguration

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Struct libmatchtigs::GreedytigAlgorithmConfiguration

Fields

Auto Trait Implementations

impl RefUnwindSafe for GreedytigAlgorithmConfiguration

impl Send for GreedytigAlgorithmConfiguration

impl Sync for GreedytigAlgorithmConfiguration

impl Unpin for GreedytigAlgorithmConfiguration

impl UnwindSafe for GreedytigAlgorithmConfiguration

Blanket Implementations

impl<T> Any for Twhere T: 'static + ?Sized,

fn type_id(&self) -> TypeId

impl<T> Borrow<T> for Twhere T: ?Sized,

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fn fmt_binary(self) -> FmtBinary<Self>where Self: Binary,

fn fmt_display(self) -> FmtDisplay<Self>where Self: Display,

fn fmt_lower_exp(self) -> FmtLowerExp<Self>where Self: LowerExp,

fn fmt_lower_hex(self) -> FmtLowerHex<Self>where Self: LowerHex,

fn fmt_octal(self) -> FmtOctal<Self>where Self: Octal,

fn fmt_pointer(self) -> FmtPointer<Self>where Self: Pointer,

fn fmt_upper_exp(self) -> FmtUpperExp<Self>where Self: UpperExp,

fn fmt_upper_hex(self) -> FmtUpperHex<Self>where Self: UpperHex,

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Self: AsRef<U>,
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Self: Deref<Target = T>,
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Self: Borrow<B>,
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Self: AsRef<R>,
R: ?Sized,

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Self: Deref<Target = T>,
T: ?Sized,

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T: ?Sized,

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Self: AsRef<R>,
R: ?Sized,

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Self: AsMut<R>,
R: ?Sized,

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Self: Deref<Target = T>,
T: ?Sized,

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Self: DerefMut<Target = T> + Deref,
T: ?Sized,

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