Enum IoError 

pub enum IoError {
    Io(Error),
    FastaParse(String),
    Hat2Format(String),
    LocalHomFormat(String),
    EmptyInput,
    BlankBeforeHeader {
        line: usize,
        text: String,
    },
    IllegalTitleCharInSequence,
    SeqCountMismatch {
        expected: usize,
        got: usize,
    },
}

Variants

Io(Error)

FastaParse(String)

Hat2Format(String)

LocalHomFormat(String)

EmptyInput

BlankBeforeHeader

A description line preceded by blanks (^[[:blank:]]+>). C MAFFT rejects the whole input (scripts/mafft:1827-1834, exit 1); a lenient parser would silently fold the line into the previous sequence. line is 1-based, text the offending line verbatim.

Fields

line: usize

text: String

IllegalTitleCharInSequence

=, < or > inside a sequence line on the case-preserving (--anysymbol / --preservecase) path. C’s charfilter (io.c:1329-1352) exits 1 on these because readData_pointer uses them as record markers.

SeqCountMismatch

Fields

expected: usize

got: usize

Trait Implementations

impl Debug for IoError

fn fmt(&self, f: &mut Formatter<'_>) -> Result<(), Error>

Formats the value using the given formatter.

impl Display for IoError

fn fmt(&self, __formatter: &mut Formatter<'_>) -> Result<(), Error>

Formats the value using the given formatter.

impl Error for IoError

fn source(&self) -> Option<&(dyn Error + 'static)>

Returns the lower-level source of this error, if any.

fn description(&self) -> &str

👎Deprecated since 1.42.0:

use the Display impl or to_string()

fn cause(&self) -> Option<&dyn Error>

👎Deprecated since 1.33.0:

replaced by Error::source, which can support downcasting

fn provide<'a>(&'a self, request: &mut Request<'a>)

🔬This is a nightly-only experimental API. (error_generic_member_access)

Provides type-based access to context intended for error reports.

impl From<Error> for IoError

fn from(source: Error) -> IoError

Converts to this type from the input type.