Enum ScoringModel 

pub enum ScoringModel {
    Blosum(i32),
    Jtt(i32),
    Tm(i32),
    Dna,
    UserDefined,
}

Which substitution matrix model to use.

Jtt(pam) and Tm(pam) carry the PAM value (C MAFFT default = 200, DEFAULTPAMN in JTT.c). Pass non-200 values to mirror mafft --jtt N or mafft --tm N.

Variants

Blosum(i32)

Jtt(i32)

Tm(i32)

Dna

UserDefined

Trait Implementations

impl Clone for ScoringModel

fn clone(&self) -> ScoringModel

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Copy for ScoringModel

impl Debug for ScoringModel

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Eq for ScoringModel

impl PartialEq for ScoringModel

fn eq(&self, other: &ScoringModel) -> bool

Equality operator ==.

fn ne(&self, other: &Rhs) -> bool

Inequality operator !=.

impl StructuralPartialEq for ScoringModel