Struct CompressedKmerFrequencyList 

pub struct CompressedKmerFrequencyList { /* private fields */ }

A compressed representation for a sorted list of k-mer and count pairs.

Implementations

impl CompressedKmerFrequencyList

pub fn new() -> CompressedKmerFrequencyList

Create an empty CompressedKmerFrequencyList

pub fn len(&self) -> usize

Return the number of k-mer, frequency pairs in the list

pub fn push(&mut self, x_f: (Kmer, usize))

Add a k-mer and count to the compressed list.

The k-mer x must be greater than or equal to the last k-mer on the list.

pub fn iter( &self, ) -> CompressedKmerFrequencyListIterator<'_, impl Iterator<Item = &u8>>

Create an iterator over the compressed list.

pub fn from_iter<Src>(src: Src) -> CompressedKmerFrequencyList

where Src: Iterator<Item = (Kmer, usize)>,

Create a new k-mer list from an iterator.