Struct Alignment 

pub struct Alignment {
    pub score: f32,
    pub positions: Vec<AlignedPosition>,
    pub cons_start: u8,
    pub cons_end: u8,
    pub confidence_score: f32,
    pub max_confidence_score: f32,
    pub query_start: usize,
    pub query_end: usize,
}

Result of aligning a sequence to a consensus

Fields

score: f32

Alignment score

positions: Vec<AlignedPosition>

Aligned positions (length == query length; flanking residues are Insertion())

cons_start: u8

First aligned consensus position (IMGT position number)

cons_end: u8

Last aligned consensus position (IMGT position number)

confidence_score: f32

Sum of scores at confidence-relevant positions (occupancy > 0.5)

max_confidence_score: f32

Sum of max possible scores at confidence-relevant positions

query_start: usize

0-based index of the first antibody residue in the query (0 when no prefix)

query_end: usize

0-based index of the last antibody residue in the query (query.len()-1 when no suffix)

Trait Implementations

impl Clone for Alignment

fn clone(&self) -> Alignment

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Alignment

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for Alignment

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Serialize for Alignment

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.