Struct IMGT 

pub struct IMGT {}

IMGT antibody germlines

Trait Implementations

impl CVSource for IMGT

type Data = Germline

The data item that is stored in the CV

type Structure = HashMap<Species, Germlines>

The type of the main datastructure to keep all data items (used to build any kind of hierarchy necessary)

fn cv_name() -> &'static str

The name of the CV, used to create the paths to store intermediate files and caches so has to be valid in that context

fn files() -> &'static [CVFile]

The source files for the

fn static_data() -> Option<(CVVersion, Self::Structure)>

The static data of this CV

fn parse( reader: impl Iterator<Item = HashBufReader<Box<dyn Read>, impl Digest>>, ) -> Result<(CVVersion, Self::Structure), Vec<BoxedError<'static, CVError>>>

Parse the textual representation of this CV

const AUTOMATICALLY_WRITE_UNCOMPRESSED: bool = false

Set this constant to true to enable automatic writing of the CV when the cahe is updated

fn default_stem() -> PathBuf

The default file stem (no extension).

fn write_uncompressed<W>( _writer: W, _version: &CVVersion, _data: impl Iterator<Item = Arc<Self::Data>>, ) -> Result<(), BoxedError<'static, CVError>>

where W: Write,

Write out the data to the standard file, only need to implement this if AUTOMATICALLY_WRITE_UNCOMPRESSED is set to true. This is used to write out data when the main way of interacting with this structure is via the crate::CVIndex::update method. So for custom modification CVs for example.