Struct FhrMetadata 

pub struct FhrMetadata {

    pub schema: Option<String>,
    pub schema_version: Option<Number>,
    pub genome: Option<String>,
    pub taxon: Option<FhrTaxon>,
    pub version: Option<String>,
    pub metadata_author: Option<Vec<FhrAuthor>>,
    pub assembly_author: Option<Vec<FhrAuthor>>,
    pub date_created: Option<String>,
    pub voucher_specimen: Option<String>,
    pub masking: Option<String>,
    pub checksum: Option<String>,
    pub genome_synonym: Option<Vec<String>>,
    pub accession_id: Option<FhrIdentifier>,
    pub instrument: Option<Vec<String>>,
    pub scholarly_article: Option<String>,
    pub documentation: Option<String>,
    pub identifier: Option<Vec<String>>,
    pub license: Option<String>,
    pub related_link: Option<Vec<String>>,
    pub funding: Option<String>,
    pub vital_stats: Option<FhrVitalStats>,
    pub seqcol_digest: Option<String>,
    pub extra: HashMap<String, Value>,
}

FAIR Headers Reference genome (FHR) metadata for a sequence collection.

All fields are optional to allow partial metadata. RefgetStore does not enforce FHR schema compliance – that’s the user’s responsibility.

Fields

schema: Option<String>

URL to the FHR JSON schema

schema_version: Option<Number>

FHR schema version (numeric per spec, e.g. 1 or 1.0)

genome: Option<String>

Genome name (e.g., “Homo sapiens”)

taxon: Option<FhrTaxon>

Taxonomy information

version: Option<String>

Genome version (e.g., “GRCh38.p14”)

metadata_author: Option<Vec<FhrAuthor>>

Who created the metadata (ORCID URIs)

assembly_author: Option<Vec<FhrAuthor>>

Who assembled the genome

date_created: Option<String>

Assembly creation date (ISO 8601)

voucher_specimen: Option<String>

Description of the physical sample

masking: Option<String>

Masking type

checksum: Option<String>

File-level checksum (SHA2-512/256 per FHR spec)

genome_synonym: Option<Vec<String>>

Alternative common names for this genome

accession_id: Option<FhrIdentifier>

Database accession identifier (single object per spec)

instrument: Option<Vec<String>>

Sequencing instruments used

scholarly_article: Option<String>

DOI or scholarly article reference (single string per spec)

documentation: Option<String>

Documentation about the genome

identifier: Option<Vec<String>>

Identifiers of the genome (namespace:value format)

license: Option<String>

License information

related_link: Option<Vec<String>>

Related URLs

funding: Option<String>

Funding information (single string per spec)

vital_stats: Option<FhrVitalStats>

General statistics about the genome assembly

seqcol_digest: Option<String>

Seqcol digest (added by RefgetStore, not part of FHR 1.0)

extra: HashMap<String, Value>

Catch-all for any other FHR fields or custom extensions

Trait Implementations

impl Clone for FhrMetadata

fn clone(&self) -> FhrMetadata

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for FhrMetadata

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for FhrMetadata

fn default() -> FhrMetadata

Returns the “default value” for a type.

impl<'de> Deserialize<'de> for FhrMetadata

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Serialize for FhrMetadata

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.