gfa_reader

Struct Walk

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pub struct Walk {
    pub sample_id: String,
    pub hap_index: usize,
    pub seq_id: String,
    pub seq_start: usize,
    pub seq_end: usize,
    pub walk_segments: Vec<String>,
    pub walk_dir: Vec<bool>,
}
Expand description

Path features:

  • names
  • Directions of the nodes
  • Node names
  • Overlap

Comment: When there is not that many paths, the amount of memory for the overlap is not that much.

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§sample_id: String§hap_index: usize§seq_id: String§seq_start: usize§seq_end: usize§walk_segments: Vec<String>§walk_dir: Vec<bool>

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impl Debug for Walk

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more

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impl Freeze for Walk

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impl RefUnwindSafe for Walk

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impl Send for Walk

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impl Sync for Walk

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impl Unpin for Walk

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impl UnwindSafe for Walk

Blanket Implementations§

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more
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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more
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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T, U> TryFrom<U> for T
where U: Into<T>,

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type Error = Infallible

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.
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impl<T, U> TryInto<U> for T
where U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.