Struct SamHeader 

pub struct SamHeader {
    pub lines: Vec<String>,
    pub references: Vec<RefSeq>,
    /* private fields */
}

SAM file header

Fields

lines: Vec<String>

Header lines (e.g., @HD, @SQ, @RG, @PG, @CO)

references: Vec<RefSeq>

Reference sequences (from @SQ lines)

Implementations

impl SamHeader

pub fn new() -> Self

Create a new empty SAM header

pub fn ref_index(&self, name: &str) -> Option<usize>

Get reference index by name

pub fn ref_name(&self, idx: usize) -> Option<&str>

Get reference name by index

Trait Implementations

impl Clone for SamHeader

fn clone(&self) -> SamHeader

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for SamHeader

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for SamHeader

fn default() -> Self

Returns the “default value” for a type.