Struct GenomicInterval 

pub struct GenomicInterval {
    pub chrom: String,
    pub start: u64,
    pub end: u64,
}

Represents a genomic interval (chromosome + start + end)

Fields

chrom: String

Chromosome name

start: u64

Start position (0-based, inclusive)

end: u64

End position (0-based, exclusive)

Implementations

impl GenomicInterval

pub fn new(chrom: impl Into<String>, start: u64, end: u64) -> Result<Self>

Create a new genomic interval

pub fn contains(&self, pos: &GenomicPosition) -> bool

Check if this interval contains a position

pub fn len(&self) -> u64

Calculate the length of this interval

pub fn is_empty(&self) -> bool

Check if this interval is empty

Trait Implementations

impl Clone for GenomicInterval

fn clone(&self) -> GenomicInterval

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for GenomicInterval

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Hash for GenomicInterval

fn hash<__H: Hasher>(&self, state: &mut __H)

Feeds this value into the given Hasher.

fn hash_slice<H>(data: &[Self], state: &mut H)

where H: Hasher, Self: Sized,

Feeds a slice of this type into the given Hasher.

impl PartialEq for GenomicInterval

fn eq(&self, other: &GenomicInterval) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Eq for GenomicInterval

impl StructuralPartialEq for GenomicInterval