Struct Sequence 

pub struct Sequence {
    pub hash: HashId,
    pub sequence_type: String,
    pub name: String,
    pub file_path: String,
    pub length: i64,
    pub external_sequence: bool,
    /* private fields */
}

Fields

hash: HashId

sequence_type: String

name: String

file_path: String

length: i64

external_sequence: bool

Implementations

impl Sequence

pub fn new() -> NewSequence<'static>

pub fn get_sequence( &self, start: impl Into<Option<i64>>, end: impl Into<Option<i64>>, ) -> String

pub fn delete_by_hash(conn: &GraphConnection, hash: &HashId)

pub fn query_by_blockgroup( conn: &GraphConnection, block_group_id: &HashId, ) -> Vec<Sequence>

Trait Implementations

impl<'a> Capnp<'a> for Sequence

type Builder = Builder<'a>

type Reader = Reader<'a>

fn write_capnp(&self, builder: &mut Self::Builder)

fn read_capnp(reader: Self::Reader) -> Self

impl Clone for Sequence

fn clone(&self) -> Sequence

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Sequence

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for Sequence

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl<'a> From<&'a Sequence> for NewSequence<'a>

fn from(value: &'a Sequence) -> NewSequence<'a>

Converts to this type from the input type.

impl Hash for Sequence

fn hash<__H: Hasher>(&self, state: &mut __H)

Feeds this value into the given Hasher.

fn hash_slice<H>(data: &[Self], state: &mut H)

where H: Hasher, Self: Sized,

Feeds a slice of this type into the given Hasher.

impl PartialEq for Sequence

fn eq(&self, other: &Sequence) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Query for Sequence

const PRIMARY_KEY: &'static str = "hash"

const TABLE_NAME: &'static str = "sequences"

type Model = Sequence

fn process_row(row: &Row<'_>) -> Self::Model

fn query( conn: &Connection, query: &str, params: impl Params, ) -> Vec<Self::Model>

fn get( conn: &Connection, query: &str, params: impl Params, ) -> Result<Self::Model>

fn get_by_id<'a, T>(conn: &Connection, id: &'a T) -> Option<Self::Model>

where T: Clone + 'a, Value: From<T>,

fn query_by_ids<'a, I: ?Sized, T>( conn: &Connection, ids: &'a I, ) -> Vec<Self::Model>

where &'a I: IntoIterator<Item = &'a T>, T: Clone + 'a, Value: From<T>,

fn delete_by_ids<'a, I: ?Sized, T>( conn: &Connection, ids: &'a I, ) -> Vec<Self::Model>

where &'a I: IntoIterator<Item = &'a T>, T: Clone + 'a, Value: From<T>,

fn table_name() -> &'static str

fn all(conn: &Connection) -> Vec<Self::Model>

fn all_with_limit(conn: &Connection, limit: usize) -> Vec<Self::Model>

impl Serialize for Sequence

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.

impl Eq for Sequence

impl StructuralPartialEq for Sequence