Struct Annotation 

pub struct Annotation {
    pub id: HashId,
    pub name: String,
    pub group: String,
    pub accession_id: HashId,
}

Fields

id: HashId

name: String

group: String

accession_id: HashId

Implementations

impl Annotation

pub fn generate_id(name: &str, group: &str, accession_id: &HashId) -> HashId

pub fn create( conn: &GraphConnection, name: &str, group: &str, accession_id: &HashId, ) -> Result<Annotation, AnnotationError>

pub fn get_or_create( conn: &GraphConnection, name: &str, group: &str, accession_id: &HashId, ) -> Result<Annotation, AnnotationError>

pub fn create_with_samples( conn: &GraphConnection, name: &str, group: &str, accession_id: &HashId, sample_names: &[&str], ) -> Result<Annotation, AnnotationError>

pub fn add_samples( &self, conn: &GraphConnection, sample_names: &[&str], ) -> Result<(), AnnotationError>

pub fn get_samples( conn: &GraphConnection, annotation_group: &str, ) -> Result<Vec<String>, AnnotationError>

pub fn query_by_sample( conn: &GraphConnection, sample_name: &str, ) -> Result<Vec<Annotation>, AnnotationError>

pub fn query_by_group( conn: &GraphConnection, group: &str, ) -> Result<Vec<Annotation>, AnnotationError>

Trait Implementations

impl<'a> Capnp<'a> for Annotation

type Builder = Builder<'a>

type Reader = Reader<'a>

fn write_capnp(&self, builder: &mut Self::Builder)

fn read_capnp(reader: Self::Reader) -> Self

impl Clone for Annotation

fn clone(&self) -> Annotation

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for Annotation

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for Annotation

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl PartialEq for Annotation

fn eq(&self, other: &Annotation) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Query for Annotation

const TABLE_NAME: &'static str = "annotations"

type Model = Annotation

fn process_row(row: &Row<'_>) -> Self::Model

const PRIMARY_KEY: &'static str = "id"

fn query( conn: &Connection, query: &str, params: impl Params, ) -> Vec<Self::Model>

fn get( conn: &Connection, query: &str, params: impl Params, ) -> Result<Self::Model>

fn get_by_id<'a, T>(conn: &Connection, id: &'a T) -> Option<Self::Model>

where T: Clone + 'a, Value: From<T>,

fn query_by_ids<'a, I: ?Sized, T>( conn: &Connection, ids: &'a I, ) -> Vec<Self::Model>

where &'a I: IntoIterator<Item = &'a T>, T: Clone + 'a, Value: From<T>,

fn delete_by_ids<'a, I: ?Sized, T>( conn: &Connection, ids: &'a I, ) -> Vec<Self::Model>

where &'a I: IntoIterator<Item = &'a T>, T: Clone + 'a, Value: From<T>,

fn table_name() -> &'static str

fn all(conn: &Connection) -> Vec<Self::Model>

fn all_with_limit(conn: &Connection, limit: usize) -> Vec<Self::Model>

impl Serialize for Annotation

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.

impl Eq for Annotation

impl StructuralPartialEq for Annotation