Struct PathwaySelectOptions 

pub struct PathwaySelectOptions<'a> {
    pub keyword: &'a str,
    pub mode: MatchMode,
    pub exclude_superpathways: bool,
    pub only_active: bool,
    pub valid_tax_ids: &'a [String],
}

Fields

keyword: &'a str

User keyword. Interpretation depends on mode.

mode: MatchMode

exclude_superpathways: bool

If true, drop rows where superpathway == TRUE or hierarchy contains Super-Pathways. Matches filter_pathways.R:32-34.

only_active: bool

Only keep pathways whose status column is TRUE.

valid_tax_ids: &'a [String]

Set of NCBI tax IDs (as strings, no TAX- prefix) that pathways must overlap via their taxrange column. Pass empty to disable the taxonomic filter.

Trait Implementations

impl<'a> Default for PathwaySelectOptions<'a>

fn default() -> Self

Returns the “default value” for a type.