Struct BiomassComponent 

pub struct BiomassComponent {
    pub id: String,
    pub name: String,
    pub comp: String,
    pub coef: f64,
    pub link: String,
}

Fields

id: String

name: String

comp: String

Compartment code: c (cytosol), e (extracellular), p (periplasm).

coef: f64

link: String

Optional coupled metabolite, encoded as "<cpd>:<coef>". Empty when absent.

Implementations

impl BiomassComponent

pub fn link(&self) -> Option<(&str, f64)>

Decode the link field into (metabolite id, stoichiometric coefficient).

Single link form. For entries like "cpd01997:-1|cpd03422:-1" with multiple coupled metabolites, use Self::links instead.

pub fn links(&self) -> Vec<(&str, f64)>

Decode the link field into every (cpd, coef) it encodes. The |-separator is how gapseq chains multiple couplings on one biomass component (e.g., Calomide → consume both cpd01997 and cpd03422).

Trait Implementations

impl Clone for BiomassComponent

fn clone(&self) -> BiomassComponent

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for BiomassComponent

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for BiomassComponent

fn deserialize<__D>(__deserializer: __D) -> Result<Self, __D::Error>

where __D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Serialize for BiomassComponent

fn serialize<__S>(&self, __serializer: __S) -> Result<__S::Ok, __S::Error>

where __S: Serializer,

Serialize this value into the given Serde serializer.