Struct fibertools_rs::cli::StripBasemodsOptions
source · pub struct StripBasemodsOptions {
pub bam: String,
pub out: String,
pub basemod: String,
}
Fields§
§bam: String
Bam HiFi file with base mods
out: String
Output bam file
basemod: String
base modification to strip out of the bam file
Trait Implementations§
source§impl Args for StripBasemodsOptions
impl Args for StripBasemodsOptions
source§fn augment_args<'b>(__clap_app: Command) -> Command
fn augment_args<'b>(__clap_app: Command) -> Command
source§impl Debug for StripBasemodsOptions
impl Debug for StripBasemodsOptions
source§impl FromArgMatches for StripBasemodsOptions
impl FromArgMatches for StripBasemodsOptions
source§fn from_arg_matches(__clap_arg_matches: &ArgMatches) -> Result<Self, Error>
fn from_arg_matches(__clap_arg_matches: &ArgMatches) -> Result<Self, Error>
source§fn from_arg_matches_mut(
__clap_arg_matches: &mut ArgMatches
) -> Result<Self, Error>
fn from_arg_matches_mut( __clap_arg_matches: &mut ArgMatches ) -> Result<Self, Error>
source§fn update_from_arg_matches(
&mut self,
__clap_arg_matches: &ArgMatches
) -> Result<(), Error>
fn update_from_arg_matches( &mut self, __clap_arg_matches: &ArgMatches ) -> Result<(), Error>
Assign values from
ArgMatches
to self
.source§fn update_from_arg_matches_mut(
&mut self,
__clap_arg_matches: &mut ArgMatches
) -> Result<(), Error>
fn update_from_arg_matches_mut( &mut self, __clap_arg_matches: &mut ArgMatches ) -> Result<(), Error>
Assign values from
ArgMatches
to self
.source§impl PartialEq for StripBasemodsOptions
impl PartialEq for StripBasemodsOptions
source§fn eq(&self, other: &StripBasemodsOptions) -> bool
fn eq(&self, other: &StripBasemodsOptions) -> bool
This method tests for
self
and other
values to be equal, and is used
by ==
.impl Eq for StripBasemodsOptions
impl StructuralPartialEq for StripBasemodsOptions
Auto Trait Implementations§
impl Freeze for StripBasemodsOptions
impl RefUnwindSafe for StripBasemodsOptions
impl Send for StripBasemodsOptions
impl Sync for StripBasemodsOptions
impl Unpin for StripBasemodsOptions
impl UnwindSafe for StripBasemodsOptions
Blanket Implementations§
source§impl<T> BorrowMut<T> for Twhere
T: ?Sized,
impl<T> BorrowMut<T> for Twhere
T: ?Sized,
source§fn borrow_mut(&mut self) -> &mut T
fn borrow_mut(&mut self) -> &mut T
Mutably borrows from an owned value. Read more
source§impl<Q, K> Equivalent<K> for Q
impl<Q, K> Equivalent<K> for Q
source§impl<Q, K> Equivalent<K> for Q
impl<Q, K> Equivalent<K> for Q
source§fn equivalent(&self, key: &K) -> bool
fn equivalent(&self, key: &K) -> bool
Compare self to
key
and return true
if they are equal.source§impl<T> Pointable for T
impl<T> Pointable for T
source§impl<SS, SP> SupersetOf<SS> for SPwhere
SS: SubsetOf<SP>,
impl<SS, SP> SupersetOf<SS> for SPwhere
SS: SubsetOf<SP>,
source§fn to_subset(&self) -> Option<SS>
fn to_subset(&self) -> Option<SS>
The inverse inclusion map: attempts to construct
self
from the equivalent element of its
superset. Read moresource§fn is_in_subset(&self) -> bool
fn is_in_subset(&self) -> bool
Checks if
self
is actually part of its subset T
(and can be converted to it).source§fn to_subset_unchecked(&self) -> SS
fn to_subset_unchecked(&self) -> SS
Use with care! Same as
self.to_subset
but without any property checks. Always succeeds.source§fn from_subset(element: &SS) -> SP
fn from_subset(element: &SS) -> SP
The inclusion map: converts
self
to the equivalent element of its superset.