Struct BaseMod 

pub struct BaseMod {
    pub modified_base: u8,
    pub strand: char,
    pub modification_type: char,
    pub ranges: Ranges,
    pub record_is_reverse: bool,
}

Fields

modified_base: u8

strand: char

modification_type: char

ranges: Ranges

record_is_reverse: bool

Implementations

impl BaseMod

pub fn new( record: &Record, modified_base: u8, strand: char, modification_type: char, modified_bases_forward: Vec<i64>, modified_probabilities_forward: Vec<u8>, ) -> Self

pub fn is_m6a(&self) -> bool

pub fn is_cpg(&self) -> bool

pub fn filter_at_read_ends(&mut self, n_strip: i64)

Trait Implementations

impl Clone for BaseMod

fn clone(&self) -> BaseMod

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for BaseMod

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Ord for BaseMod

fn cmp(&self, other: &BaseMod) -> Ordering

This method returns an Ordering between self and other.

fn max(self, other: Self) -> Self

where Self: Sized,

Compares and returns the maximum of two values.

fn min(self, other: Self) -> Self

where Self: Sized,

Compares and returns the minimum of two values.

fn clamp(self, min: Self, max: Self) -> Self

where Self: Sized,

Restrict a value to a certain interval.

impl PartialEq for BaseMod

fn eq(&self, other: &BaseMod) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl PartialOrd for BaseMod

fn partial_cmp(&self, other: &BaseMod) -> Option<Ordering>

This method returns an ordering between self and other values if one exists.

fn lt(&self, other: &Rhs) -> bool

Tests less than (for self and other) and is used by the < operator.

fn le(&self, other: &Rhs) -> bool

Tests less than or equal to (for self and other) and is used by the <= operator.

fn gt(&self, other: &Rhs) -> bool

Tests greater than (for self and other) and is used by the > operator.

fn ge(&self, other: &Rhs) -> bool

Tests greater than or equal to (for self and other) and is used by the >= operator.

impl Eq for BaseMod

impl StructuralPartialEq for BaseMod