List of all items

Structs

• FiberOut
• center::CenterPosition
• center::CenteredFiberData
• cli::Cli
• extract::BaseMod
• extract::BaseMods
• extract::FiberseqData

Enums

• cli::Commands

Functions

• bam_reader
• bamlift::closest_query_positions
• bamlift::closest_reference_positions
• bamlift::get_closest_reference_range
• bamlift::get_exact_query_positions
• bamlift::get_exact_reference_positions
• bamlift::is_sorted
• bamlift::merge_two_lists
• bamlift::merge_two_lists_with_qual
• bamlift::positions_on_complimented_sequence
• bamlift::search_sorted
• center::center
• center::center_fiberdata
• center::read_center_positions
• cli::make_cli_app
• cli::make_cli_parse
• extract::extract_contained
• extract::get_u32_tag
• extract::get_u8_tag
• extract::process_bam_chunk
• find_pb_polymerase
• join_by_str
• predict_m6a::add_mm_ml
• predict_m6a::apply_model
• predict_m6a::hot_one_dna
• predict_m6a::ml_score_transform
• predict_m6a::predict_m6a
• predict_m6a::read_bam_into_fiberdata
• unzip_to_vectors
• write_to_file
• write_to_stdout
• writer
• xgb::get_saved_gbdt_model
• xgb::predict_with_xgb