Enum GenomicStudyDataFormat

pub enum GenomicStudyDataFormat {
    Bam,
    Bed,
    Bedgraph,
    Bedpe,
    BigWig,
    Bigbed,
    BirdsuiteFiles,
    Broadpeak,
    Cbs,
    ChemicalReactivityProbingProfiles,
    ChromSizes,
    Cn,
    Cram,
    CustomFileFormats,
    Cytoband,
    Fasta,
    Gct,
    Genepred,
    GffGtf,
    Gistic,
    Goby,
    Gwas,
    Igv,
    Loh,
    MafMultipleAlignmentFormat,
    MafMutationAnnotationFormat,
    MergedBamFile,
    Mut,
    Narrowpeak,
    Psl,
    Res,
    RnaSecondaryStructureFormats,
    Sam,
    SampleInfoAttributesFile,
    Seg,
    Tdf,
    TrackLine,
    TypeLine,
    Vcf,
    Wig,
}

GenomicStudyDataFormat. The data format relevant to genomics. These formats and relevant codes were pulled from Integrative Genomics Viewer Documentation by Broad Institute.

FHIR version: 5.0.0.

Variants

Bam

bam

BAM.

Bed

bed

BED.

Bedgraph

bedgraph

BedGraph.

Bedpe

bedpe

BEDPE.

BigWig

bigWig

bigWig.

Bigbed

bigbed

bigBed.

BirdsuiteFiles

birdsuite-files

Birdsuite-Files.

Broadpeak

broadpeak

broadPeak.

Cbs

cbs

CBS.

ChemicalReactivityProbingProfiles

chemical-reactivity-probing-profiles

Chemical-Reactivity-Probing-Profiles.

ChromSizes

chrom-sizes

chrom-sizes.

Cn

cn

CN.

Cram

cram

CRAM.

CustomFileFormats

custom-file-formats

Custom-File-Formats.

Cytoband

cytoband

Cytoband.

Fasta

fasta

FASTA.

Gct

gct

GCT.

Genepred

genepred

genePred.

GffGtf

gff-gtf

GFF/GTF.

Gistic

gistic

GISTIC.

Goby

goby

Goby.

Gwas

gwas

GWAS.

Igv

igv

IGV.

Loh

loh

LOH.

MafMultipleAlignmentFormat

maf-multiple-alignment-format

MAF-Multiple Alignment Format.

MafMutationAnnotationFormat

maf-mutation-annotation-format

MAF-Mutation-Annotation-Format.

MergedBamFile

merged-bam-file

Merged BAM File.

Mut

mut

MUT.

Narrowpeak

narrowpeak

narrowPeak.

Psl

psl

PSL.

Res

res

RES.

RnaSecondaryStructureFormats

rna-secondary-structure-formats

RNA-Secondary-Structure-Formats.

Sam

sam

SAM.

SampleInfoAttributesFile

sample-info-attributes-file

Sample-Info-Attributes-file.

Seg

seg

SEG.

Tdf

tdf

TDF.

TrackLine

track-line

Track Line.

TypeLine

type-line

Type Line.

Vcf

vcf

VCF.

Wig

wig

WIG.

Trait Implementations

impl AsRef<str> for GenomicStudyDataFormat

fn as_ref(&self) -> &str

Converts this type into a shared reference of the (usually inferred) input type.

impl Clone for GenomicStudyDataFormat

fn clone(&self) -> GenomicStudyDataFormat

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for GenomicStudyDataFormat

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'de> Deserialize<'de> for GenomicStudyDataFormat

fn deserialize<D>(deserializer: D) -> Result<Self, D::Error>

where D: Deserializer<'de>,

Deserialize this value from the given Serde deserializer.

impl Display for GenomicStudyDataFormat

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl From<GenomicStudyDataFormat> for CodeableConcept

fn from(code: GenomicStudyDataFormat) -> Self

Converts to this type from the input type.

impl From<GenomicStudyDataFormat> for Coding

fn from(code: GenomicStudyDataFormat) -> Self

Converts to this type from the input type.

impl FromStr for GenomicStudyDataFormat

type Err = String

The associated error which can be returned from parsing.

fn from_str(s: &str) -> Result<Self, Self::Err>

Parses a string s to return a value of this type.

impl Hash for GenomicStudyDataFormat

fn hash<__H: Hasher>(&self, state: &mut __H)

Feeds this value into the given Hasher.

fn hash_slice<H>(data: &[Self], state: &mut H)

where H: Hasher, Self: Sized,

Feeds a slice of this type into the given Hasher.

impl PartialEq for GenomicStudyDataFormat

fn eq(&self, other: &GenomicStudyDataFormat) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl Serialize for GenomicStudyDataFormat

fn serialize<S>(&self, serializer: S) -> Result<S::Ok, S::Error>

where S: Serializer,

Serialize this value into the given Serde serializer.

impl Copy for GenomicStudyDataFormat

impl Eq for GenomicStudyDataFormat

impl StructuralPartialEq for GenomicStudyDataFormat