Enum FilterResult

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pub enum FilterResult {
    Pass,
    InsufficientReads,
    ExcessiveErrorRate,
    LowQuality,
    TooManyNoCalls,
}

Expand description

Result of filtering a consensus read

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Pass

Read passed all filters

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InsufficientReads

Read failed minimum reads threshold

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ExcessiveErrorRate

Read failed maximum error rate threshold

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LowQuality

Read failed minimum mean base quality threshold

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TooManyNoCalls

Read failed maximum no-call fraction threshold

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impl FilterResult

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pub fn to_rejection_reason(&self) -> Option<RejectionReason>

Converts a FilterResult to a RejectionReason, if rejected.

Returns None if the result is Pass, otherwise returns the corresponding rejection reason for tracking in metrics and logging.

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impl Clone for FilterResult

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fn clone(&self) -> FilterResult

Returns a duplicate of the value. Read more

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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more

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impl Debug for FilterResult

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fn fmt(&self, f: &mut Formatter<'_>) -> Result<(), Error>

Formats the value using the given formatter. Read more

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impl PartialEq for FilterResult

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fn eq(&self, other: &FilterResult) -> bool

Tests for self and other values to be equal, and is used by ==.

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fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

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impl Copy for FilterResult

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impl Eq for FilterResult

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impl StructuralPartialEq for FilterResult

Auto Trait Implementations§

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impl UnwindSafe for FilterResult

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more

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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more

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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more

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impl<T> CloneToUninit for T
where T: Clone,

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)

Performs copy-assignment from self to dest. Read more

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impl<Q, K> Equivalent<K> for Q
where Q: Eq + ?Sized, K: Borrow<Q> + ?Sized,

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fn equivalent(&self, key: &K) -> bool

Compare self to key and return true if they are equal.

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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> IntoEither for T

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fn into_either(self, into_left: bool) -> Either<Self, Self>

Converts self into a Left variant of Either<Self, Self> if into_left is true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more

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fn into_either_with<F>(self, into_left: F) -> Either<Self, Self>
where F: FnOnce(&Self) -> bool,

Converts self into a Left variant of Either<Self, Self> if into_left(&self) returns true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more

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