Struct CodecConsensusStats

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pub struct CodecConsensusStats {
    pub total_input_reads: u64,
    pub consensus_reads_generated: u64,
    pub reads_filtered: u64,
    pub consensus_reads_rejected_hdd: u64,
    pub consensus_bases_emitted: u64,
    pub consensus_duplex_bases_emitted: u64,
    pub duplex_disagreement_base_count: u64,
    pub rejection_reasons: HashMap<RejectionReason, usize>,
}

Expand description

Statistics for CODEC consensus calling

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§total_input_reads: u64

Total input reads processed

§consensus_reads_generated: u64

Total consensus reads generated

§reads_filtered: u64

Total reads filtered/rejected

§consensus_reads_rejected_hdd: u64

Consensus reads rejected for high duplex disagreement

§consensus_bases_emitted: u64

Total consensus bases emitted

§consensus_duplex_bases_emitted: u64

Total duplex region bases emitted

§duplex_disagreement_base_count: u64

Total duplex disagreement bases

§rejection_reasons: HashMap<RejectionReason, usize>

Rejection reasons

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impl CodecConsensusStats

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pub fn duplex_disagreement_rate(&self) -> f64

Calculates the duplex disagreement rate

Trait Implementations§

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impl Clone for CodecConsensusStats

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fn clone(&self) -> CodecConsensusStats

Returns a duplicate of the value. Read more

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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more

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impl Debug for CodecConsensusStats

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fn fmt(&self, f: &mut Formatter<'_>) -> Result<(), Error>

Formats the value using the given formatter. Read more

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impl Default for CodecConsensusStats

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fn default() -> CodecConsensusStats

Returns the “default value” for a type. Read more

Auto Trait Implementations§

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impl UnwindSafe for CodecConsensusStats

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more

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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more

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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more

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impl<T> CloneToUninit for T
where T: Clone,

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)

Performs copy-assignment from self to dest. Read more

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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> IntoEither for T

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fn into_either(self, into_left: bool) -> Either<Self, Self>

Converts self into a Left variant of Either<Self, Self> if into_left is true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more

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fn into_either_with<F>(self, into_left: F) -> Either<Self, Self>
where F: FnOnce(&Self) -> bool,

Converts self into a Left variant of Either<Self, Self> if into_left(&self) returns true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more

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