Struct Normalizer 

pub struct Normalizer<P: ReferenceProvider> { /* private fields */ }

Main normalizer struct

Implementations

impl<P: ReferenceProvider> Normalizer<P>

pub fn new(provider: P) -> Self

Create a new normalizer with the given reference provider

pub fn with_config(provider: P, config: NormalizeConfig) -> Self

Create a normalizer with custom configuration

pub fn config(&self) -> &NormalizeConfig

Get the configuration

pub fn normalize( &self, variant: &HgvsVariant, ) -> Result<HgvsVariant, FerroError>

Normalize a variant

In strict mode (default), rejects variants with reference mismatches. Use normalize_with_warnings for lenient mode that corrects mismatches.

pub fn normalize_with_warnings( &self, variant: &HgvsVariant, ) -> Result<NormalizeResultWithWarnings, FerroError>

Normalize a variant with detailed warnings

Returns the normalized variant along with any warnings generated during normalization (e.g., reference sequence mismatches that were auto-corrected). Use this method when you want to track what corrections were made.