Struct RefRecord

pub struct RefRecord<'a> { /* private fields */ }

A fastq record that borrows data from an array.

Implementations

impl<'a> RefRecord<'a>

pub fn to_owned_record(&self) -> OwnedRecord

Copy the borrowed data array and return an owned record.

Trait Implementations

impl<'a> Debug for RefRecord<'a>

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<'a> Record for RefRecord<'a>

fn head(&self) -> &[u8]

Return the id-line of the record as byte slice

fn seq(&self) -> &[u8]

Return the fastq sequence as byte slice

fn qual(&self) -> &[u8]

Return the quality of the bases as byte slice

fn write<W: Write>(&self, writer: &mut W) -> Result<usize>

Write the record to a writer

fn validate_dna(&self) -> bool

Return true if the sequence contains only A, C, T and G.

fn validate_dnan(&self) -> bool

Return true if the sequence contains only A, C, T, G and N.