Struct BAMScan 

pub struct BAMScan { /* private fields */ }

Implements a datafusion ExecutionPlan for BAM files.

Implementations

impl BAMScan

pub fn new(base_config: FileScanConfig) -> Self

Create a new BAM scan.

pub fn with_region_filter(self, region_filter: Region) -> Self

Set the region filter for the scan.

Trait Implementations

impl Clone for BAMScan

fn clone(&self) -> BAMScan

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for BAMScan

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl DisplayAs for BAMScan

fn fmt_as(&self, _t: DisplayFormatType, f: &mut Formatter<'_>) -> Result

Format according to DisplayFormatType, used when verbose representation looks different from the default one

impl ExecutionPlan for BAMScan

fn as_any(&self) -> &dyn Any

Returns the execution plan as Any so that it can be downcast to a specific implementation.

fn properties(&self) -> &PlanProperties

Return properties of the output of the ExecutionPlan, such as output ordering(s), partitioning information etc.

fn statistics(&self) -> Result<Statistics>

Returns statistics for this ExecutionPlan node. If statistics are not available, should return Statistics::new_unknown (the default), not an error.

fn name(&self) -> &str

Short name for the ExecutionPlan, such as ‘ParquetExec’.

fn repartitioned( &self, target_partitions: usize, _config: &ConfigOptions, ) -> Result<Option<Arc<dyn ExecutionPlan>>>

If supported, attempt to increase the partitioning of this ExecutionPlan to produce target_partitions partitions.

fn schema(&self) -> SchemaRef

Get the schema for this execution plan

fn children(&self) -> Vec<&Arc<dyn ExecutionPlan>>

Get a list of children ExecutionPlans that act as inputs to this plan. The returned list will be empty for leaf nodes such as scans, will contain a single value for unary nodes, or two values for binary nodes (such as joins).

fn with_new_children( self: Arc<Self>, _children: Vec<Arc<dyn ExecutionPlan>>, ) -> Result<Arc<dyn ExecutionPlan>>

Returns a new ExecutionPlan where all existing children were replaced by the children, in order

fn execute( &self, partition: usize, context: Arc<TaskContext>, ) -> Result<SendableRecordBatchStream>

Begin execution of partition, returning a Stream of RecordBatches.

fn static_name() -> &'static str

where Self: Sized,

Short name for the ExecutionPlan, such as ‘ParquetExec’. Like name but can be called without an instance.

fn required_input_distribution(&self) -> Vec<Distribution>

Specifies the data distribution requirements for all the children for this ExecutionPlan, By default it’s [Distribution::UnspecifiedDistribution] for each child,

fn required_input_ordering(&self) -> Vec<Option<LexRequirement>>

Specifies the ordering required for all of the children of this ExecutionPlan.

fn maintains_input_order(&self) -> Vec<bool>

Returns false if this ExecutionPlan’s implementation may reorder rows within or between partitions.

fn benefits_from_input_partitioning(&self) -> Vec<bool>

Specifies whether the ExecutionPlan benefits from increased parallelization at its input for each child.

fn metrics(&self) -> Option<MetricsSet>

Return a snapshot of the set of Metrics for this ExecutionPlan. If no Metrics are available, return None.

fn supports_limit_pushdown(&self) -> bool

Returns true if a limit can be safely pushed down through this ExecutionPlan node.

fn with_fetch(&self, _limit: Option<usize>) -> Option<Arc<dyn ExecutionPlan>>

Returns a fetching variant of this ExecutionPlan node, if it supports fetch limits. Returns None otherwise.

fn fetch(&self) -> Option<usize>

Gets the fetch count for the operator, None means there is no fetch.

fn cardinality_effect(&self) -> CardinalityEffect

Gets the effect on cardinality, if known