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OmittedSequenceCodec

Struct OmittedSequenceCodec 

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pub struct OmittedSequenceCodec;
Expand description

Omitted sequence storage.

This codec stores no sequence payload bytes and always decodes to an empty byte string. It is intended for payload-light temporary files where sequence data is deliberately absent.

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impl Clone for OmittedSequenceCodec

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fn clone(&self) -> OmittedSequenceCodec

Returns a duplicate of the value. Read more
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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more
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impl Debug for OmittedSequenceCodec

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fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter. Read more
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impl Default for OmittedSequenceCodec

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fn default() -> OmittedSequenceCodec

Returns the “default value” for a type. Read more
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impl SequenceCodec for OmittedSequenceCodec

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const TYPE_TAG: [u8; 16]

Stable type tag written into block headers.
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const LOSSY: bool = true

Whether this encoding is lossy.
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fn encode_into( _sequence: &[u8], _output: &mut Vec<u8>, ) -> Result<(), DryIceError>

Encode a raw ASCII nucleotide sequence, appending the encoded bytes directly into the provided output buffer. Read more
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fn decode_into( _encoded: &[u8], original_len: usize, output: &mut Vec<u8>, ) -> Result<(), DryIceError>

Decode an encoded buffer, appending the decoded ASCII bytes directly into the provided output buffer. Read more
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const IS_IDENTITY: bool = false

Whether the encoded form is identical to the raw input bytes. When true, the decoder can skip decoding and return slices directly into the block’s payload buffer.
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fn encode(sequence: &[u8]) -> Result<Vec<u8>, DryIceError>

Encode a sequence, returning a new allocated buffer. Read more
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fn decode(encoded: &[u8], original_len: usize) -> Result<Vec<u8>, DryIceError>

Decode an encoded buffer, returning a new allocated buffer. Read more
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impl Copy for OmittedSequenceCodec

Auto Trait Implementations§

Blanket Implementations§

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impl<T> Any for T
where T: 'static + ?Sized,

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fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more
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impl<T> Borrow<T> for T
where T: ?Sized,

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fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more
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impl<T> BorrowMut<T> for T
where T: ?Sized,

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fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more
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impl<T> CloneToUninit for T
where T: Clone,

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unsafe fn clone_to_uninit(&self, dest: *mut u8)

🔬This is a nightly-only experimental API. (clone_to_uninit)
Performs copy-assignment from self to dest. Read more
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impl<T> From<T> for T

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fn from(t: T) -> T

Returns the argument unchanged.

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impl<T, U> Into<U> for T
where U: From<T>,

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fn into(self) -> U

Calls U::from(self).

That is, this conversion is whatever the implementation of From<T> for U chooses to do.

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impl<T> IntoEither for T

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fn into_either(self, into_left: bool) -> Either<Self, Self>

Converts self into a Left variant of Either<Self, Self> if into_left is true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more
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fn into_either_with<F>(self, into_left: F) -> Either<Self, Self>
where F: FnOnce(&Self) -> bool,

Converts self into a Left variant of Either<Self, Self> if into_left(&self) returns true. Converts self into a Right variant of Either<Self, Self> otherwise. Read more
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impl<T> ToOwned for T
where T: Clone,

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type Owned = T

The resulting type after obtaining ownership.
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fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more
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fn clone_into(&self, target: &mut T)

Uses borrowed data to replace owned data, usually by cloning. Read more
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impl<T, U> TryFrom<U> for T
where U: Into<T>,

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type Error = Infallible

The type returned in the event of a conversion error.
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fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

Performs the conversion.
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impl<T, U> TryInto<U> for T
where U: TryFrom<T>,

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type Error = <U as TryFrom<T>>::Error

The type returned in the event of a conversion error.
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fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Performs the conversion.
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impl<V, T> VZip<V> for T
where V: MultiLane<T>,

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fn vzip(self) -> V