Struct StructuralVariant 

pub struct StructuralVariant {
    pub sv_type: StructralVariantType,
    pub chr: BString,
    pub breakpoint1: usize,
    pub breakpoint2: usize,
}

A StructuralVariant is a genomic interval defined by a chromosome, a start position and an end position.

Fields

sv_type: StructralVariantType

chr: BString

breakpoint1: usize

breakpoint2: usize

Trait Implementations

impl Clone for StructuralVariant

fn clone(&self) -> StructuralVariant

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for StructuralVariant

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Display for StructuralVariant

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl FromStr for StructuralVariant

fn from_str(s: &str) -> Result<Self, Self::Err>

Parse a string into a StructuralVariant. The string should be formatted as

Example

use deepbiop_utils::sv::StructuralVariant;
let value =  "DEL:chr1:100-200";
let sv: StructuralVariant = value.parse().unwrap();

type Err = Error

The associated error which can be returned from parsing.