Struct GenomeBuildIdentifier 

pub struct GenomeBuildIdentifier { /* private fields */ }

All information needed to identify a genome build.

Implementations

impl GenomeBuildIdentifier

pub fn major_assembly(&self) -> &str

Get a &str with the major assembly identifier.

use dabuild::{GenomeBuild, GenomeBuildIdentifier};
use dabuild::builds::get_grch38_p13;

let build: GenomeBuild = get_grch38_p13();

assert_eq!(build.id().major_assembly(), "GRCh38");

pub fn patch(&self) -> Option<&str>

Get the patch identifier or None if the build identifier has no patch info.

use dabuild::{GenomeBuild, GenomeBuildIdentifier};
use dabuild::builds::get_grch38_p13;

let build: GenomeBuild = get_grch38_p13();

assert_eq!(build.id().patch(), Some("p13"));

Trait Implementations

impl Clone for GenomeBuildIdentifier

fn clone(&self) -> GenomeBuildIdentifier

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for GenomeBuildIdentifier

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<T> From<(T, T)> for GenomeBuildIdentifier

where T: ToString,

Create GenomeBuildIdentifier from a tuple.

The tuple must contain two items:

• major assembly
• patch

Use GenomeBuildIdentifier::from_str to create the identifier without a patch.

fn from(value: (T, T)) -> Self

Converts to this type from the input type.

impl FromStr for GenomeBuildIdentifier

Create GenomeBuildIdentifier from a &str, using it as a major assembly.

Infallible.

type Err = Infallible

The associated error which can be returned from parsing.

fn from_str(s: &str) -> Result<Self, Self::Err>

Parses a string s to return a value of this type.

impl Hash for GenomeBuildIdentifier

fn hash<__H: Hasher>(&self, state: &mut __H)

Feeds this value into the given Hasher.

fn hash_slice<H>(data: &[Self], state: &mut H)

where H: Hasher, Self: Sized,

Feeds a slice of this type into the given Hasher.

impl Ord for GenomeBuildIdentifier

fn cmp(&self, other: &GenomeBuildIdentifier) -> Ordering

This method returns an Ordering between self and other.

fn max(self, other: Self) -> Self

where Self: Sized,

Compares and returns the maximum of two values.

fn min(self, other: Self) -> Self

where Self: Sized,

Compares and returns the minimum of two values.

fn clamp(self, min: Self, max: Self) -> Self

where Self: Sized,

Restrict a value to a certain interval.

impl PartialEq for GenomeBuildIdentifier

fn eq(&self, other: &GenomeBuildIdentifier) -> bool

Tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &Rhs) -> bool

Tests for !=. The default implementation is almost always sufficient, and should not be overridden without very good reason.

impl PartialOrd for GenomeBuildIdentifier

fn partial_cmp(&self, other: &GenomeBuildIdentifier) -> Option<Ordering>

This method returns an ordering between self and other values if one exists.

fn lt(&self, other: &Rhs) -> bool

Tests less than (for self and other) and is used by the < operator.

fn le(&self, other: &Rhs) -> bool

Tests less than or equal to (for self and other) and is used by the <= operator.

fn gt(&self, other: &Rhs) -> bool

Tests greater than (for self and other) and is used by the > operator.

fn ge(&self, other: &Rhs) -> bool

Tests greater than or equal to (for self and other) and is used by the >= operator.

impl Eq for GenomeBuildIdentifier

impl StructuralPartialEq for GenomeBuildIdentifier