Struct d4::D4MatrixReader

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pub struct D4MatrixReader<S: SecondaryTableReader> { /* private fields */ }

Implementations

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impl<S: SecondaryTableReader> D4MatrixReader<S>

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pub fn chrom_regions(&self) -> Vec<(&str, u32, u32 )>

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pub fn new<T: IntoIterator<Item = D4TrackReader<BitArrayReader, S>>>(
tracks: T
) -> Result<Self>

Trait Implementations

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impl<S: SecondaryTableReader> MultiTrackReader for D4MatrixReader<S>

type PartitionType = D4MatrixReaderPartition<S>

The type for partition reader

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fn split(
&mut self,
size_limit: Option<usize>
) -> Result<Vec<Self::PartitionType>>

Split a multi track reader into different partitions

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fn run_tasks<RS, T>(&mut self, tasks: RS) -> Result<TaskOutputVec<T::Output>> where
 Self: Sized,
 T: Task<<Self::PartitionType as MultiTrackPartitionReader>::RowType>,
 RS: IntoTaskVec<<Self::PartitionType as MultiTrackPartitionReader>::RowType, T>,
 Self::PartitionType: Send,

Create a task on this reader

Auto Trait Implementations

impl<S> RefUnwindSafe for D4MatrixReader<S> where
S: RefUnwindSafe,

impl<S> Send for D4MatrixReader<S> where
S: Send,

impl<S> Sync for D4MatrixReader<S> where
S: Sync,

impl<S> Unpin for D4MatrixReader<S> where
S: Unpin,

impl<S> UnwindSafe for D4MatrixReader<S> where
S: UnwindSafe,

Blanket Implementations

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impl<T> Any for T where
T: 'static + ?Sized,

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pub fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more

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impl<T> Borrow<T> for T where
T: ?Sized,

const: unstable · source

pub fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more

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impl<T> BorrowMut<T> for T where
T: ?Sized,

const: unstable · source

pub fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more

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impl<T> From<T> for T

const: unstable · source

pub fn from(t: T) -> T

Performs the conversion.

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impl<T> Instrument for T

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fn instrument(self, span: Span) -> Instrumented<Self>

Instruments this type with the provided Span, returning an Instrumented wrapper. Read more

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fn in_current_span(self) -> Instrumented<Self>

Instruments this type with the current Span, returning an Instrumented wrapper. Read more

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impl<T, U> Into for T where
U: From<T>,

const: unstable · source

pub fn into(self) -> U

Performs the conversion.

impl<T> Pointable for T

pub const ALIGN: usize

The alignment of pointer.

type Init = T

The type for initializers.

pub unsafe fn init(init: <T as Pointable>::Init) -> usize

Initializes a with the given initializer. Read more

pub unsafe fn deref<'a>(ptr: usize) -> &'a T

Dereferences the given pointer. Read more

pub unsafe fn deref_mut<'a>(ptr: usize) -> &'a mut T

Mutably dereferences the given pointer. Read more

pub unsafe fn drop(ptr: usize)

Drops the object pointed to by the given pointer. Read more

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impl<T, U> TryFrom for T where
U: Into<T>,

type Error = Infallible

The type returned in the event of a conversion error.

const: unstable · source

pub fn try_from(value: U) -> Result<T, <T as TryFrom>::Error>

Performs the conversion.

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impl<T, U> TryInto for T where
U: TryFrom<T>,

type Error = >::Error

The type returned in the event of a conversion error.

const: unstable · source

pub fn try_into(self) -> Result<U, >::Error>

Performs the conversion.

impl<V, T> VZip<V> for T where
V: MultiLane<T>,

pub fn vzip(self) -> V

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impl<T> WithSubscriber for T

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fn with_subscriber<S>(self, subscriber: S) -> WithDispatch<Self> where
S: Into<Dispatch>,

Attaches the provided Subscriber to this type, returning a WithDispatch wrapper. Read more

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fn with_current_subscriber(self) -> WithDispatch<Self>

Attaches the current default Subscriber to this type, returning a WithDispatch wrapper. Read more

Struct d4::D4MatrixReader

Implementations

impl<S: SecondaryTableReader> D4MatrixReader<S>

pub fn chrom_regions(&self) -> Vec<(&str, u32, u32)>

pub fn new<T: IntoIterator<Item = D4TrackReader<BitArrayReader, S>>>( tracks: T) -> Result<Self>

Trait Implementations

impl<S: SecondaryTableReader> MultiTrackReader for D4MatrixReader<S>

type PartitionType = D4MatrixReaderPartition<S>

fn split( &mut self, size_limit: Option<usize>) -> Result<Vec<Self::PartitionType>>

fn run_tasks<RS, T>(&mut self, tasks: RS) -> Result<TaskOutputVec<T::Output>> where Self: Sized, T: Task<<Self::PartitionType as MultiTrackPartitionReader>::RowType>, RS: IntoTaskVec<<Self::PartitionType as MultiTrackPartitionReader>::RowType, T>, Self::PartitionType: Send,

Auto Trait Implementations

impl<S> RefUnwindSafe for D4MatrixReader<S> where S: RefUnwindSafe,

impl<S> Send for D4MatrixReader<S> where S: Send,

impl<S> Sync for D4MatrixReader<S> where S: Sync,

impl<S> Unpin for D4MatrixReader<S> where S: Unpin,

impl<S> UnwindSafe for D4MatrixReader<S> where S: UnwindSafe,

Blanket Implementations

impl<T> Any for T where T: 'static + ?Sized,

pub fn type_id(&self) -> TypeId

impl<T> Borrow<T> for T where T: ?Sized,

pub fn borrow(&self) -> &T

impl<T> BorrowMut<T> for T where T: ?Sized,

pub fn borrow_mut(&mut self) -> &mut T

impl<T> From<T> for T

pub fn from(t: T) -> T

impl<T> Instrument for T

fn instrument(self, span: Span) -> Instrumented<Self>

fn in_current_span(self) -> Instrumented<Self>

impl<T, U> Into<U> for T where U: From<T>,

pub fn into(self) -> U

impl<T> Pointable for T

pub const ALIGN: usize

type Init = T

pub unsafe fn init(init: <T as Pointable>::Init) -> usize

pub unsafe fn deref<'a>(ptr: usize) -> &'a T

pub unsafe fn deref_mut<'a>(ptr: usize) -> &'a mut T

pub unsafe fn drop(ptr: usize)

impl<T, U> TryFrom<U> for T where U: Into<T>,

type Error = Infallible

pub fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

impl<T, U> TryInto<U> for T where U: TryFrom<T>,

type Error = <U as TryFrom<T>>::Error

pub fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

impl<V, T> VZip<V> for T where V: MultiLane<T>,

pub fn vzip(self) -> V

impl<T> WithSubscriber for T

fn with_subscriber<S>(self, subscriber: S) -> WithDispatch<Self> where S: Into<Dispatch>,

fn with_current_subscriber(self) -> WithDispatch<Self>

pub fn chrom_regions(&self) -> Vec<(&str, u32, u32 )>

pub fn new<T: IntoIterator<Item = D4TrackReader<BitArrayReader, S>>>(
tracks: T
) -> Result<Self>

fn split(
&mut self,
size_limit: Option<usize>
) -> Result<Vec<Self::PartitionType>>

fn run_tasks<RS, T>(&mut self, tasks: RS) -> Result<TaskOutputVec<T::Output>> where
Self: Sized,
T: Task<<Self::PartitionType as MultiTrackPartitionReader>::RowType>,
RS: IntoTaskVec<<Self::PartitionType as MultiTrackPartitionReader>::RowType, T>,
Self::PartitionType: Send,

impl<S> RefUnwindSafe for D4MatrixReader<S> where
S: RefUnwindSafe,

impl<S> Send for D4MatrixReader<S> where
S: Send,

impl<S> Sync for D4MatrixReader<S> where
S: Sync,

impl<S> Unpin for D4MatrixReader<S> where
S: Unpin,

impl<S> UnwindSafe for D4MatrixReader<S> where
S: UnwindSafe,

impl<T> Any for T where
T: 'static + ?Sized,

impl<T> Borrow<T> for T where
T: ?Sized,

impl<T> BorrowMut<T> for T where
T: ?Sized,

impl<T, U> Into<U> for T where
U: From<T>,

impl<T, U> TryFrom<U> for T where
U: Into<T>,

impl<T, U> TryInto<U> for T where
U: TryFrom<T>,

impl<V, T> VZip<V> for T where
V: MultiLane<T>,

fn with_subscriber<S>(self, subscriber: S) -> WithDispatch<Self> where
S: Into<Dispatch>,