Enum IbuCommand 

pub enum IbuCommand {
    View(ArgsView),
    Cat(ArgsCat),
    Sort(ArgsSort),
    Count(ArgsCount),
    Umi(ArgsUmi),
    Reads(ArgsReads),
}

Perform operations on an IBU library

Variants

View(ArgsView)

View the contents of an IBU library as plain text

Cat(ArgsCat)

Concatenate the contents of multiple IBU libraries

Sort(ArgsSort)

Sort the contents of an IBU library

Count(ArgsCount)

Create barcode-index count matrix from an IBU library

Umi(ArgsUmi)

Correct UMI errors in an IBU library

Expects a sorted IBU library as input

Reads(ArgsReads)

Determine number of reads and UMIs per barcode

Trait Implementations

impl Debug for IbuCommand

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl FromArgMatches for IbuCommand

fn from_arg_matches(__clap_arg_matches: &ArgMatches) -> Result<Self, Error>

Instantiate Self from ArgMatches, parsing the arguments as needed.

fn from_arg_matches_mut( __clap_arg_matches: &mut ArgMatches, ) -> Result<Self, Error>

Instantiate Self from ArgMatches, parsing the arguments as needed.

fn update_from_arg_matches( &mut self, __clap_arg_matches: &ArgMatches, ) -> Result<(), Error>

Assign values from ArgMatches to self.

fn update_from_arg_matches_mut<'b>( &mut self, __clap_arg_matches: &mut ArgMatches, ) -> Result<(), Error>

Assign values from ArgMatches to self.

impl Subcommand for IbuCommand

fn augment_subcommands<'b>(__clap_app: Command) -> Command

Append to Command so it can instantiate Self via FromArgMatches::from_arg_matches_mut

fn augment_subcommands_for_update<'b>(__clap_app: Command) -> Command

Append to Command so it can instantiate self via FromArgMatches::update_from_arg_matches_mut

fn has_subcommand(__clap_name: &str) -> bool

Test whether Self can parse a specific subcommand