Struct GoAnnotation 

pub struct GoAnnotation { /* private fields */ }

A collection of GO term annotations.

Implementations

impl GoAnnotation

pub fn new(terms: Vec<GoTerm>) -> Result<Self>

Create from a pre-built list of GO terms.

pub fn from_entries( entries: &[(usize, &str, &str, GoNamespace)], ) -> Result<Self>

Build from per-gene annotation entries, merging rows with the same term ID.

Each entry is (gene_index, term_id, term_name, namespace), mirroring the one-row-per-annotation structure of GAF files.

pub fn n_terms(&self) -> usize

Number of distinct GO terms.

pub fn n_genes(&self) -> usize

Number of distinct genes across all terms.

pub fn terms_for_gene(&self, gene: usize) -> Vec<&str>

Return all term IDs that annotate a given gene.

pub fn filter_namespace(&self, ns: GoNamespace) -> Result<Self>

Filter to a single namespace, returning a new GoAnnotation.

Trait Implementations

impl Clone for GoAnnotation

fn clone(&self) -> GoAnnotation

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for GoAnnotation

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.