Struct LocalSubgraph 

pub struct LocalSubgraph<const K: usize> {
    pub graph_id: usize,
    pub colored: bool,
    pub cutoff: u32,
    pub vertices: LocalVertexMap<K>,
    pub edges: HashSet<LocalEdge<K>, FastBuildHasher>,
    pub stats: LocalSubgraphStats,
}

Fields

graph_id: usize

colored: bool

cutoff: u32

vertices: LocalVertexMap<K>

edges: HashSet<LocalEdge<K>, FastBuildHasher>

stats: LocalSubgraphStats

Implementations

impl<const K: usize> LocalSubgraph<K>

pub fn from_bucket_path( path: impl AsRef<Path>, cutoff: u32, ) -> Result<Self, LocalSubgraphError>

pub fn from_manifest_entries( store: &BucketStore, entries: &[BucketManifestEntry], cutoff: u32, ) -> Result<Self, LocalSubgraphError>

pub fn vertex_state(&self, kmer: Kmer<K>) -> Option<&VertexState>

pub fn contract(&mut self) -> Result<Vec<LocalUnitig<K>>, LocalSubgraphError>

pub fn contract_compact( &mut self, ) -> Result<Vec<LocalUnitig<K>>, LocalSubgraphError>

pub fn contract_colored( &mut self, store: &BucketStore, entries: &[BucketManifestEntry], ) -> Result<Vec<ColoredLocalUnitig<K>>, LocalSubgraphError>

pub fn contract_colored_with_known<F>( &mut self, store: &BucketStore, entries: &[BucketManifestEntry], color_is_known: F, ) -> Result<Vec<ColoredLocalUnitig<K>>, LocalSubgraphError>

where F: Fn(u64) -> Option<ColorCoordinate>,

Trait Implementations

impl<const K: usize> Clone for LocalSubgraph<K>

fn clone(&self) -> LocalSubgraph<K>

Returns a duplicate of the value.

fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl<const K: usize> Debug for LocalSubgraph<K>

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl<const K: usize> Eq for LocalSubgraph<K>

impl<const K: usize> PartialEq for LocalSubgraph<K>

fn eq(&self, other: &LocalSubgraph<K>) -> bool

Equality operator ==.

fn ne(&self, other: &Rhs) -> bool

Inequality operator !=.

impl<const K: usize> StructuralPartialEq for LocalSubgraph<K>