[package]
edition = "2021"
name = "xpclrs"
version = "1.0.1"
authors = ["Andrea Talenti"]
build = false
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "A high-performance rust implementation of the XP-CLR method."
readme = "README.md"
keywords = [
"genome",
"bioinformatics",
"sequencing",
"selection",
]
categories = ["science::bioinformatics"]
license = "MIT"
repository = "https://github.com/RenzoTale88/xpclrs"
[lib]
name = "xpclrs"
path = "src/lib.rs"
[[bin]]
name = "xpclrs"
path = "src/main.rs"
[dependencies.anyhow]
version = "1.0.98"
[dependencies.clap]
version = "4.5.42"
[dependencies.counter]
version = "0.7.0"
[dependencies.env_logger]
version = "0.11"
[dependencies.flate2]
version = "1.0.35"
[dependencies.itertools]
version = "0.14.0"
[dependencies.log]
version = "0.4"
[dependencies.niffler]
version = "2.5.0"
[dependencies.rand]
version = "0.9.2"
[dependencies.rayon]
version = "1.10.0"
[dependencies.rust-htslib]
version = "0.51.0"
[dependencies.rustc-hash]
version = "2.1.1"
[dependencies.scirs2-integrate]
version = "0.1.0-beta.2"
features = [
"simd",
"parallel",
]
[dependencies.statistical]
version = "1.0.0"
[dependencies.statrs]
version = "0.18.0"