xcell-rust 0.1.0

Pure-Rust port of xCell (Aran et al. 2017) cell-type enrichment — ssGSEA, spillover-corrected — validated for numeric parity against the R xCell package. Built on gsva-rust.
Documentation
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[package]
edition = "2021"
rust-version = "1.85"
name = "xcell-rust"
version = "0.1.0"
build = false
exclude = [
    "/benchmarks",
    "/examples",
    "/scratch",
]
autolib = false
autobins = false
autoexamples = false
autotests = false
autobenches = false
description = "Pure-Rust port of xCell (Aran et al. 2017) cell-type enrichment — ssGSEA, spillover-corrected — validated for numeric parity against the R xCell package. Built on gsva-rust."
readme = "README.md"
keywords = [
    "bioinformatics",
    "deconvolution",
    "xcell",
    "immune",
    "rna-seq",
]
categories = ["science"]
license = "GPL-3.0-or-later"
repository = "https://github.com/sinmojito/xcell-rust"

[features]
default = ["parallel"]
parallel = [
    "dep:rayon",
    "gsva-rust/parallel",
]

[lib]
name = "xcell"
path = "src/lib.rs"

[[test]]
name = "parity_synthetic"
path = "tests/parity_synthetic.rs"

[dependencies.gsva-rust]
version = "0.1"
default-features = false

[dependencies.rayon]
version = "1"
optional = true