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use rand::rngs::SmallRng;
use rand::{Rng, SeedableRng};
use serde::Serialize;
use std::cmp::Ordering;
use std::error::Error;
#[derive(Debug, Serialize)]
struct Record {
point: Vec<f64>,
}
pub struct PointSet {
pub points: Vec<Vec<f64>>,
pub distance_matrix: Vec<Vec<f64>>,
pub active: Vec<bool>,
pub nb_active: usize,
idx_sort: Vec<Vec<usize>>,
idx_active: Vec<usize>,
visited: Vec<bool>,
d_min: f64,
d_max: f64,
}
impl PointSet {
pub fn init_from_preset(points: Vec<Vec<f64>>) -> PointSet {
let (distance_matrix, d_min, d_max) = PointSet::compute_distance_matrix(&points, None);
let mut p = PointSet {
distance_matrix,
active: vec![true; points.len()],
nb_active: points.len(),
idx_sort: Vec::with_capacity(points.len()),
idx_active: vec![1; points.len()],
visited: vec![false; points.len()],
points,
d_max,
d_min,
};
p.compute_closest_idx();
p
}
pub fn init_from_random(nb_points: usize, nb_dim: usize, seed: u64) -> PointSet {
let mut points: Vec<Vec<f64>> = Vec::with_capacity(nb_points);
let mut rng = SmallRng::seed_from_u64(seed);
for _ in 0..nb_points {
let mut point: Vec<f64> = Vec::with_capacity(nb_dim);
for _ in 0..nb_dim {
point.push(rng.gen::<f64>());
}
points.push(point);
}
PointSet::init_from_preset(points)
}
fn reset_reseach_params(&mut self) {
self.nb_active = self.points.len();
self.active = vec![true; self.nb_active];
self.idx_active = vec![1; self.nb_active];
self.visited = vec![false; self.nb_active];
}
fn compute_closest_idx(&mut self) {
for i in 0..self.nb_active {
let mut idxs: Vec<usize> = (0..self.nb_active).collect();
idxs.sort_by(|&a, &b| {
self.distance_matrix[i][a]
.partial_cmp(&self.distance_matrix[i][b])
.unwrap()
});
self.idx_sort.push(idxs);
}
}
pub fn _print_from_idx(&self, i: usize) {
let point: &Vec<f64> = &self.points[i];
println!("Vec#{}: {:?}", i, point);
}
fn compute_distance_matrix(
points: &[Vec<f64>],
distance_algo: Option<&dyn Fn(&[f64], &[f64]) -> f64>,
) -> (Vec<Vec<f64>>, f64, f64) {
let nb_points = points.len();
let mut distance_matrix = vec![vec![0.0f64; nb_points]; nb_points];
let mut dmin: f64 = f64::MAX;
let mut dmax: f64 = 0.0;
for i in 0..nb_points {
for j in i + 1..nb_points {
distance_matrix[i][j] = match distance_algo {
Some(algo) => algo(&points[i], &points[j]),
None => manhattan_distance(&points[i], &points[j]),
};
distance_matrix[j][i] = distance_matrix[i][j];
dmin = dmin.min(distance_matrix[i][j]);
dmax = dmax.max(distance_matrix[i][j]);
}
}
(distance_matrix, dmin, dmax)
}
pub fn save_in_csv(&self, filepath: &str) -> Result<(), Box<dyn Error>> {
let mut wrt = csv::WriterBuilder::new()
.has_headers(false)
.from_path(filepath)?;
for (i, point) in (&(*self.points)).iter().enumerate() {
if !self.active[i] {
continue;
}
wrt.serialize(Record {
point: point.clone(),
})?;
}
Ok(())
}
pub fn get_remaining(&self) -> Vec<Vec<f64>> {
let mut points: Vec<Vec<f64>> = Vec::with_capacity(self.nb_active);
for i in 0..self.points.len() {
if self.active[i] {
points.push(self.points[i].clone());
}
}
points
}
}
fn _distance_sq(p1: &[f64], p2: &[f64]) -> f64 {
let mut dist: f64 = 0.0;
for i in 0..p1.len() {
dist += (p1[i] - p2[i]) * (p1[i] - p2[i]);
}
dist
}
fn manhattan_distance(p1: &[f64], p2: &[f64]) -> f64 {
p1.iter()
.zip(p2.iter())
.fold(0.0, |dist, (d1, d2)| dist + (d1 - d2).abs())
}
fn wsp_loop_fast(set: &mut PointSet, d_min: f64, mut origin: usize) {
loop {
let idxs_this_origin = &mut set.idx_sort[origin];
let mut closest_origin = set.idx_active[origin];
set.visited[origin] = true;
loop {
if closest_origin >= set.points.len() {
return;
}
let point_idx = idxs_this_origin[closest_origin];
if !set.active[point_idx] {
closest_origin += 1;
continue;
} else if set.distance_matrix[origin][point_idx] < d_min {
set.active[point_idx] = false;
set.nb_active -= 1;
closest_origin += 1;
} else if set.visited[point_idx] {
closest_origin += 1;
} else {
set.idx_active[origin] = closest_origin;
origin = idxs_this_origin[closest_origin];
break;
}
}
}
}
pub fn wsp(set: &mut PointSet, d_min: f64) {
let mut rng = SmallRng::seed_from_u64(10);
let origin: usize = rng.gen::<usize>() % set.points.len();
wsp_loop_fast(set, d_min, origin);
}
pub fn adaptive_wsp(set: &mut PointSet, obj_nb: usize, verbose: bool) {
let mut d_min = set.d_min;
let mut d_max = set.d_max;
let mut d_search = (d_min + d_max) / 2.0;
let mut iter = 0;
let mut best_distance = 0.0;
let mut best_difference_active = set.nb_active - obj_nb;
loop {
iter += 1;
wsp(set, d_search);
if verbose {
println!(
"Iter #{}: distance={}, nb_active={}",
iter, d_search, set.nb_active
);
}
match set.nb_active.cmp(&obj_nb) {
Ordering::Greater => d_min = d_search,
Ordering::Less => d_max = d_search,
Ordering::Equal => return,
};
if (set.nb_active as i32 - obj_nb as i32).abs() < best_difference_active as i32 {
best_difference_active = (set.nb_active as i32 - obj_nb as i32).abs() as usize;
best_distance = d_search;
}
let last_d_search = d_search;
d_search = (d_min + d_max) / 2.0;
if (last_d_search - d_search).abs() <= f64::EPSILON {
break;
}
set.reset_reseach_params();
}
if (best_distance - d_search).abs() > f64::EPSILON {
d_search = best_distance;
set.reset_reseach_params();
wsp(set, d_search);
}
if verbose {
println!(
"Last iter: best approximation is distance={}, nb_active={}",
d_search, set.nb_active
);
}
}
#[cfg(test)]
mod tests {
use super::*;
#[test]
fn test_distance_sq() {
let mut p1: Vec<f64> = vec![1.0, 0.0];
let mut p2 = vec![0.0, 0.0];
assert_eq!(_distance_sq(&p1, &p2), 1.0);
p1 = vec![2.0, 2.0];
p2 = vec![2.0, 9.0];
assert_eq!(_distance_sq(&p1, &p2), 49.0);
}
#[test]
fn test_manhattan_distance() {
let p1 = vec![0.0, 0.0, 0.0];
let p2 = vec![0.5, 0.5, 1.0];
let p3 = vec![1.0, 0.0, 0.5];
assert_eq!(manhattan_distance(&p1, &p2), 2.0);
assert_eq!(manhattan_distance(&p1, &p3), 1.5);
assert_eq!(manhattan_distance(&p2, &p3), 1.5);
assert_eq!(manhattan_distance(&p1, &p1), 0.0);
}
#[test]
fn test_distance_matrix() {
let p1 = vec![0.0, 0.0];
let p2 = vec![4.0, 0.0];
let p3 = vec![4.0, 3.0];
let (distance_matrix, d_min, d_max) =
PointSet::compute_distance_matrix(&vec![p1, p2, p3], Some(&_distance_sq));
let true_distance = vec![
vec![0.0, 16.0, 25.0],
vec![16.0, 0.0, 9.0],
vec![25.0, 9.0, 0.0],
];
for i in 0..3 {
for j in 0..3 {
assert_eq!(distance_matrix[i][j], true_distance[i][j]);
}
}
assert_eq!(d_min, 9.0);
assert_eq!(d_max, 25.0);
}
#[test]
fn test_closest_idx() {
let p1 = vec![0.0, 0.0];
let p2 = vec![1.0, 0.1];
let p3 = vec![1.0, 1.0];
let p4 = vec![2.0, 1.0];
let pointset = PointSet::init_from_preset(vec![p1, p2, p3, p4]);
let true_idxs = vec![
vec![0, 1, 2, 3],
vec![1, 2, 0, 3],
vec![2, 1, 3, 0],
vec![3, 2, 1, 0],
];
for i in 0..4 {
for j in 0..4 {
assert_eq!(pointset.idx_sort[i][j], true_idxs[i][j]);
}
}
}
#[test]
fn test_iterative_fast_1() {
let p1 = vec![0.0, 0.0];
let p2 = vec![1.0, 0.1];
let p3 = vec![1.0, 1.0];
let p4 = vec![2.0, 1.0];
let mut pointset = PointSet::init_from_preset(vec![p1, p2, p3, p4]);
wsp_loop_fast(&mut pointset, 1.0, 1);
assert_eq!(pointset.active[0], true);
assert_eq!(pointset.active[1], true);
assert_eq!(pointset.active[2], false);
assert_eq!(pointset.active[3], true);
assert_eq!(pointset.nb_active, 3);
}
#[test]
fn test_all_points_visited() {
let d_min: f64 = 0.04;
let mut points = PointSet::init_from_random(1000, 3, 51);
wsp(&mut points, d_min);
for i in 0..1000 {
assert!(points.visited[i] || !points.active[i]);
}
}
#[test]
fn test_min_dist_ok() {
let d_min: f64 = 0.04;
let mut points = PointSet::init_from_random(1000, 3, 51);
wsp(&mut points, d_min);
for i in 0..999 {
if !points.active[i] {
continue;
}
for j in i + 1..1000 {
if !points.active[j] {
continue;
}
assert!(points.distance_matrix[i][j] >= d_min);
}
}
}
}